     29    918

Antrozous_pallidus              ATG GAG GGC GCA ACA GCC GCG GAG GCG AAG CCC ACC ATG GGG GTC AAG ATC TTC TCA GCC GGA CTG GCG GCC TGT GTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACG GCC AAA GTC CGG CAA CAG ATT CAA GGT GAA TGC CCG AAC TCT GGG GCC CCG AAG TAT AAA GGT GTC CTG AGA ACA ATC ATC ACG CTG GCA AAG ACG GAA GGG CCA TTG AAG CTC TAC AAC GGA CTG CCT GCG GGC ATC CAG AGA CAA ATA AGT TCT GCC TCT CTC AGG ATC GGG CTG TAT GAG AAC GCA CGG GAG TAC TTC ACC GAG GGC AGA GAA ATT --- AGT TTA GGA GGC AGG ATC TTA GCT GGG TTA ACG ACT GGA GGA ATA TCC GTG TTC ATT GGG CAA CCC ACA GAG GTC GCG AAG GTC AGA CTT CAG GCG CAG AGC CAT ATC TAT GGT CCA AAA CCT CGC TAC ACT GGG ACT TAC AAT GCT TAC AGA ATT ATA GTA ACA ACG GAA GGA TTC TCT GGT CTT TGG AAA GGG ACT ACT CCT AAT TTG GCA AGA AAT GTC ACC ATC AAT TGT ACA GAG CTA GTG GCA TAT GAC CTA ATG AAG GAC ACC CTT GTG AAA AAC GAA ATC CTC GCA GAT GAT ATA CCC TGC CAC TTT GTG TCG GCT GTT TTC GCT GGG TTT TGT GCA ACG CTT ATG TCT TCG CCA ATG GAT GTA GTG AAA ACC AGA TTT ATA AAT TCC ATA CCA GGA CAG TAC AAG AGT GCG CAC AAT TGT GCA ATG ACC ATG TTC ATT AAG GAA GGA CCG TCA GCT TTT TTC AAA GGG TTA CTA CCT TCC TTC CTC CGA CTG GCA TCC TGG AAC GTC ATT ATG TTT GTG TGC TTC GAG CGG CTG AAA CAA GAG TTG ATG AAG ACA GGG CAG CCT GCA GAA GGA GCC ACA 
Eptesicus_fuscus                ATG GAG GGC GCC ACA GCC GCG GAG GCG CAT CCC ACC ATG GGG GTC AAG ATC TTC TCA GCC GGA TTG GCG GCC TGC GTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACG GCC AAA GTC CGG CAA CAG ATT CAA GGT GAA TGC CCC AAC TCC GGT GCC CCT AAG TAT AAA GGC GTC CTG AGA ACA GTC ATC ACT CTG GCA AAA ACG GAA GGG CCA CTG AAG CTC TAT AAC GGA CTG CCT GCT GGC CTC CAG AGA CAA ATA AGT TCT GCC TCT CTC AGG ATC GGG CTC TAT GAG ACC GCC CAG GAG TAC TTC ACC GAG GGC AGA GAA ACT --- AGT TTA GGA GGC AGG ATC TTA GCT GGG GTG ACG ACT GGA GGA ATG TCC GTG TTC ATT GGG CAA CCC ACA GAG GTC GCG AAG GTC AGA CTT CAG GCG CAG AGC CAT CTC TAC GGT CCG AAA CCT CGC TAC ACT GGG ACT TAC AAC GCT TAC AGA ATT ATA GTA ACA ACG GAA GGC TTC TCT GGA CTT TGG AAA GGG ACT ACT CCT AAT TTG GCA AGA AAT GTC ACC ATC AAT TGT ACA GAG CTA GTA GCA TAC GAC CTA ATG AAG GAC ACC CTT GTG AAA AAT GAA ATC ATG GCA GAT GAA CTA CCC TGC CAC TTT GTG TCG GCT GTT ATC GCT GGG TTT TGC GCA ACG CTT ATG TCT TCG CCA ATG GAT GTA GTG AAA ACC AGA TTT ATA AAT TCC ACA CCA GGA CAA TAC AAG AGT GCA CAC AAT TGC GCA ATG ACA ATG TTT GTT AAG GAA GGA CCG TCA GCT TTT TTC AAA GGG TTA CTA CCT TCC TTC TTG CGA CTG GCA TCC TGG AAC GTC ATT ATG TTC GTG TGC TTT GAG CGG CTG AAA CGA GAG TTG ATG AAG TCA GGG CAG CCT GCA GAC AGC GCC ACA 
Ictidomys_tridecemlineatus      ATG GTG AGC CCC ACG GCC TCC GAC GTG CAC CCG ACC ATG GGC ATC AAG ATC GTC TCA GCC GGA GTG TCA GCC TGC TTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTA CAG ATC CAA GGC GAA TTC CCT GTC TCC AGC GGT ATT ACG TAT AAA GGA GTC CTG GGA ACA ATC ACC ACC CTG GCC AAA ACT GAA GGG CCC ATG AAA CTG TAC AGC GGG CTG CCC GCG GGA CTG CAA AGG CAA ATC AGC TTC GCC TCT CTT AGG ATC GGC CTC TAT GAT TCT GTC CAG GAG TTC TTC ACC TCA GGG GAT GAA ACA CCC AGC TTG GGA AGC AAA ATC TCA GCC GGA CTC ACA ACT GGA GGA GTG GCA GTG TTC ATT GGG CAG CCC ACC GAG GTG GTG AAG GTC AGG CTC CAA GCA CAG AGC CAC CTA CAC GGT CTC AAA CCT CGC TAC ACC GGG ACC TAC AAC GCG TAC AGA ATT ATA GCA ACA ACA GAG AGC TTC AGG AGT CTT TGG AAA GGG ACT ACT CCT AAT CTG TTG AGA AAT GTC ATC ATC AAT TGC ACA GAG TTG GTA ACA TAT GAC CTG ATG AAG GGG GCT CTT GTG AGA AAC AAA ATC CTA GCA GAT GAT GTC CCC TGC CAC CTG CTG TCC GCT TTC GTC GCT GGA TTT TGC ACC ACA CTC CTG TCC TCG CCT GCT GAT GTA GTG AAG ACC AGA TTT ATT AAC TCT CCG CCA GGG CAG TAT ACC AGC GTG CCC AGA TGT GCA ATG ACA ATG CTC CAC CAG GAA GGG CCG TCG GCA TTT TTC AAA GGA TTT CTA CCT TCC TTC CTG CGA CTG GCA TCC TGG AAC CTC ATT ATG TTC GTG AGC TTT GAA CAG CTG AAA CGA GAA TTG ATG AAG TCC AGG CAG ACA GTG GAC TGC GCC ACA 
Marmota_flaviventris            ATG GTG AGC CCC ACA GCC TCC GAC GTG CAC CCG ACC ATG GGC ATC AAG ATC GTC TCA GCC GGA GTG TCA GCC TGC TTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTA CAG ATC CAA GGC GAA TTC CCA GTC TCC AGT GGT ATT AAG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACC CTG GCA AAA ACC GAA GGG CCC ATG AAA CTG TAC AGT GGG TTG CCT GCG GGA TTG CAA AGG CAA ATA AGC TTC GCC TCT CTT AGG ATC GGC CTC TAT GAT TCT GTC CAG GAG TTC TTC ACC TCA GGG AAT GAA ACA CCC AGT TTG GGA AGC AAA ATC TCA GCC GGA CTC ACA ACT GGA GGA GTG GCA GTG TTC ATT GGG CAG CCC ACC GAG GTC GTG AAG GTC AGG CTC CAA GCA CAG AGC CAC CTA CAC GGG CTC AAA CCT CGC TAC ACT GGG ACC TAC AAT GCG TAC AGA ATT ATA GCA ACA ACA GAG AGC TTC AGG AGT CTT TGG AAA GGG ACT ACT CCT AAT CTG TTG AGA AAT GTC ATC ATC AAT TGC ACA GAG TTG GTA ACA TAT GAC CTG ATG AAG GGG GCT CTT GTG AGA AAC AAA ATC CTA GCA GAT GAT GTC CCC TGC CAC CTG CTG TCC GCT TTC GTC GCT GGA TTT TGC ACC ACA CTT CTG TCC TCG CCG GCT GAT GTG GTG AAG ACC AGA TTT ATT AAC TCT CCG CCA GGG CAG TAT ACC AGC GTG CCC AGA TGT GCA ATG ACA ATG CTC TAC CAG GAA GGG CCG TCG GCG TTT TTC AAA GGA TTT GTA CCT TCC TTC CTG CGA CTG GCA TCC TGG AAC GTC ATT ATG TTC GTG AGC TTT GAA CAG CTG AAA CGA GAA TTG ATG AAG TCC AGG CAG ACA GTG GAC TGC GCC ACG 
Marmota_marmota                 ATG GTG AGC CCC ACA GCC TCC GAC GTG CAC CCG ACC ATG GGC ATC AAG ATC GTC TCA GCC GGA GTG TCA GCC TGC TTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTA CAG ATC CAA GGC GAA TTC CCA GTC TCC AGT GGT ATT AAG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACC CTG GCA AAA ACC GAA GGG CCC ATG AAA CTG TAC AGT GGG TTG CCT GCG GGA TTG CAA AGG CAA ATA AGC TTC GCC TCT CTT AGG ATC GGC CTC TAT GAT TCT GTC CAG GAG TTC TTC ACC TCA GGG AAT GAA ACA CCC AGT TTG GGA AGC AAA ATC TCA GCC GGA CTC ACA ACT GGA GGA GTG GCA GTG TTC ATT GGG CAG CCC ACC GAG GTC GTG AAG GTC AGG CTC CAA GCA CAG AGC CAC CTA CAC GGG CTC AAA CCT CGC TAC ACT GGG ACC TAC AAC GCG TAC AGA ATT ATA GCA ACA ACA GAG AGC TTC AGG AGT CTT TGG AAA GGG ACT ACT CCT AAT CTG TTG AGA AAT GTC ATC ATC AAT TGC ACA GAG TTG GTA ACA TAT GAC CTG ATG AAG GGG GCT CTT GTG AGA AAC AAA ATC CTA GCA GAT GAT GTC CCC TGC CAC CTG CTG TCC GCT TTC GTC GCT GGA TTT TGC ACC ACA CTT CTG TCC TCG CCG GCT GAT GTG GTG AAG ACC AGA TTT ATT AAC TCT CCG CCA GGG CAG TAT ACC AGC GTG CCC AGA TGT GCA ATG ACA ATG CTC CAC CAG GAA GGG CCG TCG GCG TTT TTC AAA GGA TTT GTA CCT TCC TTC CTG CGA CTG GCA TCC TGG AAC GTC ATT ATG TTC GTG AGC TTT GAA CAG CTG AAA CGA GAA TTG ATG AAG TCC AGG CAG ACA GTG GAC TGC GCC ACG 
Marmota_monax                   ATG GTG AGC CCC ACA GCC TCC GAC GTG CAC CCG ACC ATG GGC ATC AAG ATC GTC TCA GCC GGA GTG TCA GCC TGC TTG GCG GAT GTG ATC ACC TTC CCT CTG GAC ACC GCC AAA GTC CGG CTA CAG ATC CAA GGC GAA TTC CCA GTC TCC AGT GGT ATT AAG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACC CTG GCA AAA ACC GAA GGG CCC ATG AAA CTG TAC AGT GGG TTG CCT GCG GGA TTG CAA AGG CAA ATA AGC TTC GCC TCT CTT AGG ATC GGC CTC TAT GAT TCT GTC CAG GAG TTC TTC ACC TCA GGG AAT GAA ACA CCC AGT TTG GGA AGC AAA ATC TCA GCC GGA CTT ACA ACT GGA GGA GTG GCA GTG TTC ATT GGG CAG CCC ACC GAG GTC GTG AAG GTC AGG CTC CAA GCA CAG AGC CAC CTA CAT GGG CTC AAA CCT CGC TAC ACT GGG ACC TAC AAC GCG TAC AGA ATT ATA GCA ACA ACA GAG AGC TTC AGG AGT CTT TGG AAA GGG ACT ACT CCT AAT CTG TTG AGA AAT GTC ATC ATC AAT TGC ACA GAG TTG GTA ACA TAT GAC CTG ATG AAG GGG GCT CTT GTG AGA AAC AAA ATC CTA GCA GAT GAT GTC CCC TGC CAC CTG CTG TCT GCT TTC GTC GCT GGA TTT TGC ACC ACA CTT CTG TCC TCG CCG GCT GAT GTG GTG AAG ACC AGA TTT ATT AAC TCT CCG CCA GGG CAG TAT ACC AGC GTG CCC AGA TGT GCA ATG ACA ATG CTC CAC CAG GAA GGG CCG TCG GCG TTT TTC AAA GGA TTT GTA CCT TCC TTC CTG CGA CTG GCA TCC TGG AAC GTC ATT ATG TTC GTG AGC TTT GAA CAG CTG AAA CGA GAA TTG ATG AAG TCC AGG CAG ACA GTG GAC TGC GCC ACG 
Myotis_lucifugus                ATG GAG GGC GCG ACA GCC GCC GAG GCG CAT CCC ACC ATG GGG GTC AAG ATC TTC TCA GCC GGA TTG GCG GCC TGT GTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACG GCC AAA GTC CGG CAA CAG ATT CAA GGT GAA TGC CCG AAC TCC GGT GCC CCT AAG TAT AAA GGT GTC CTG AGG ACA GTC CTC ACT GTG GCA AAA ACG GAA GGG CCA CTG AAG CTC TAC AAC GGA CTG CCT GCT GGC CTG CAG AGA CAA ATC AGT TCT GCC TCT CTC CGG ATC GGG CTC TAT GAC ACC GCC CGG GAG TAC TTC ACC GAG GGC AGA GAA ACT --- AGT TTA GGA GGC AAG ATC TTA GCT GGG CTG ACG ACT GGA GGA GTG TCT GTG TTC ATT GGC CAA CCC ACA GAG GTC GCG AAG GTC AGA CTT CAG GCG CAG AGC CAT CTC TAT GGT CCG AAA CCT CGC TAC ACT GGG ACT TAC AAT GCT TAC AGA ATT ATA GTA ACA ACT GAA GGC TTG TCG GGC CTT TGG AAA GGA ACG ACT CCT AAT TTG GCA AGA AAT GTC ACC ATC AAT TGT ACA GAG CTA GTA GCG TAC GAC ATA ATG AAG GAC ACC CTT GTG AAA AAT GAA ATC CTT GCA GAT GAC CTA CCC TGC CAC TTT ATG TCG GCT GTT TTC GCT GGG TTT TGT GCA ACG CTT CTG TCT TCA CCA ATG GAT GTA GTG AAA ACC AGA TTT GTA AAT TCT ACA CCA GGA CAG TAC AAG AGT GCG CAC AAC TGC GCA ATG ACA ATG TTC ATT AAG GAA GGA CCA TCA GCT TTT TTC AAG GGG TTA CTA CCT TCC TTC TTG CGA CTG GCA TCC TGG AAC GTC ATT ATG TAC GTG TGC TTT GAG AAG CTG AAA CAA GAG TTG ATG AAG TCA GGA CAG CCC GCG GAC AGT GCC ACA 
Rhinolophus_ferrumequinum       ATG ACG GGC CCG ACA GCC TCG GAG GTG CCG CCG ACC ATG GCG GTC AAG ATT ATC TCA GCC GGA GTG GCG GCC TGT GTG GCG GAT GCC ATC ACC TTC CCG CTG GAC ACA GCC AAA GTC AGG CTA CAG ATC CAA GGT GAA TGC CCG ACC TCC ACC GCC CCT AAG TAT AAA GGC GTT CTG GGA ACC ATC ACC ACT CTG GTG AAA ACT GAA GGA CCA GTG AAA CTC TAC AGC GGG CTG CCT GCC GGC TTC CAG AGA CAG ATA AGC TCT GCC TCT CTT AGG ATT GGG CTC TAT GAC ACC GTC CAG GAG TAC TTC ACC ACA GGG AAA GAA AGT --- AGC TTA GGA AAC AAG ATC TCA GCT GGC CTA ACG ACT GGA TGT GTG GCA GTA TTC ATT GGG CAA CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAT CTA TAT GGT CCC AAA CCT CGC TAC ACT GGG ACT TAC AAC GCT TAC AGA ATT ATA GCA ACA ACT GAA GGC TTG ACA GGT CTT TGG AAA GGG ACT ACT CCC AAT CTG GCA AGA AAT GTC ATC ATC AAT TGT ACA GAG CTA GTA ACA TAC GAC CTA ATG AAG GAG GCC CTT GTG AAA AAC CAA ATA CTA GCA GAC GAT GTG CCC TGC CAT GTC GTG TCG GCT GTT ATC GCT GGA TTT TGC ACA ACA GTT CTG TCC TCT CCA GTG GAT GTG GTG AAA ACC AGA TTT GTT AAT TCT ACA CCA GGA CAG TAC CCA AGT GTG CCC AAC TGC GCA ATG ACA ATG TTC ACC AAG GAA GGA CCA TCG GCT TTC TTC AAG GGA TTA GTG CCT TCC TTC TTG AGA CTC GGA TCC TGG AAC GTC ATC ATG TTT GTG TGC TTT GAG CAG CTG AAA CGA GAA CTG ATG AAG TCG AGG CAG ACC GTG GAC TGT GCC ACG 
Urocitellus_parryii             ATG GTG AGC CCC ACA GCC TCC GAC GTG CAC CCG ACC ATG GCC ATC AAG ATC GTC TCA GCC GGA GTG TCA GCC TGC TTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTA CAG ATC CAA GGC GAA TTC CCA GTC TCC AGC GGT ATT ACG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACC CTA GCA AAA ACC GAA GGG CCC ATG AAA CTG TAC AGC GGG TTG CCT GCG GGA TTG CAA AGG CAA ATA AGC TTC GCC TCT CTT AGG ATC GGC CTC TAT GAT TCT GTC CAG GAG TAC TTC ACC TCA GGG AAT GAA ACA CCC AGT TTG GGA AGC AAA ATC TCA GCC GGA CTC ACA ACT GGA GGA GTG GCA GTG TTC ATT GGG CAG CCC ACC GAG GTG GTG AAG GTC AGG CTC CAA GCA CAG AGC CAC CTA CAT GGT CTC AAA CCT CGC TAC ACC GGG ACC TAC AAC GCG TAC AGA ATT ATA GTA ACA ACA GAG AGC TTC AGG AGT CTT TGG AAA GGG ACT ACT CCT AAT CTG TTG AGA AAC GTC ATC ATC AAT TGC ACA GAG TTG GTA ACA TAT GAC CTG ATG AAG GGG GCT CTT GTG AGA AAC AAA ATC CTA GCA GAT GAT GTC CCC TGC CAC CTG CTG TCC GCT TTC GTC GCT GGA TTT TGC ACC ACA CTC CTG TCC TCG CCT GCT GAT GTA GTG AAG ACC AGA TTT ATT AAC TCT CCG CCA GGG CAG TAT ACC AGC GTG CCC AGA TGT GCA ATG GCA ATG CTC CAC CAG GAA GGG CCG TCG GCA TTT TTC AAA GGA TTT CTA CCT TCC TTC CTG CGA CTG GCA TCC TGG AAC CTC ATT ATG TTC GTG AGC TTT GAA CAG CTG AAA CGA GAA TTG ATG AAG TCC AGG CAG ACA GTG GAC TGC GCC ACA 
Ursus_americanus                ATG GTG GGC CCG ACA GCC TCC GAC GTG CGC CCG ACG ATG ACG GTC AAG ATC TTC TCA GCC GGC GTG GCG GCC TGT GCG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTC CAG ATT CAA GGT GAA TGC CAG ACC TCC AAA GCC ATT AGG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACT CTG GCA AAA ACA GAA GGA CCA ATG AAA CTC TAT AGT GGA CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCC TCT CTT AGG ATT GGC CTC TAT GAC ACC GTG CAG GAG TTC TTC AGC ACA GGG AAA GAA ACA GCT AGT TTA GGA AGC AAG ATC GCA GCT GGT CTG ACG ACT GGA GGA GTG GCG GTG CTC ATC GGG CAA CCC ACG GAG GTC GTG AAG GTC CGA CTT CAA GCG CAG AGT CAT CTG CAC GGC CTC AAA CCT CGC TAC ACC GGG ACT TAC CAC GCT TAC AGG ATC ATA GCA ACG ACC GAA GGC CTG ACA GGC CTT TGG AAG GGG ACT ACT CCC AAT CTG ACA AGA AAT GTC ATC ATC AAT TGT ACA GAG CTA GTC ACC TAT GAC CTA ATG AAG GCG GCC CTT GTG AAA AAC AAA CTC CTA GCA GAC GAC TTA CCC TGC CAC TTC GTG TCA GCT CTC AGT GCC GGA TTT TGC ACA ACA GTC CTG TCC TCG CCA GTG GAT GTG GTA AAA ACC CGA TTT GTT AAT TCT CCC CCA GGA CAG TAC ACG AGT GTG CCC AAC TGC GCC ATG ACA ATG CTC ACT AAG GAA GGA CCG TTG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA CTC GGA TCC TGG AAC GTC ATT ATG TTT GTG TGC TTC GAA CAG CTG AAG CGA GAA CTG ATG AAG TCA GGG CCG ACC GTG GAC TGT GCC ACA 
Ursus_arctos                    ATG GTG GGC CCG ACA GCC TCC GAC GTG CGC CCG ACG ATG ACG GTC AAG ATC TTC TCA GCC GGC GTG GCG GCC TGT GCG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTC CAG ATT CAA GGT GAA TGC CAG ACC TCC AAA GCC ATT AGG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACT CTG GCA AAA ACA GAA GGA CCA ATG AAA CTC TAT AGT GGA CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCC TCT CTT AGG ATT GGC CTC TAT GAC ACC GTG CAG GAG TTC TTC AGC ACA GGG AAA GAA ACA GCT AGT TTA GGA AGC AAG ATC GCA GCT GGT CTG ACG ACT GGA GGA GTG GCG GTG TTC ATC GGG CAA CCC ACG GAG GTC GTG AAG GTC CGA CTT CAA GCG CAG AGT CAT CTG CAC GGC CTC AAA CCT CGC TAC ACC GGG ACT TAC CAC GCT TAC AGG ATC ATA GCA ACG ACC GAA GGC CTG ACA GGC CTT TGG AAG GGG ACT ACT CCC AAT CTG ACA AGA AAT GTC ATC ATC AAT TGT ACA GAG CTA GTC ACC TAT GAC CTA ATG AAG GCG GCC CTT GTG AAA AAC AAA CTC CTA GCA GAC GAC TTA CCC TGC CAC TTC GTG TCA GCT CTC AGT GCC GGA TTT TGC ACA ACA GTC CTG TCC TCG CCA GTG GAT GTG GTA AAA ACC CGA TTT GTT AAT TCT CCC CCA GGA CAG TAC ACG AGT GTG CCC AAC TGC GCC ATG ACA ATG CTC ACT AAG GAA GGA CCG TTG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA CTC GGA TCC TGG AAC GTC ATT ATG TTT GTG TGC TTC GAA CAG CTG AAG CGA GAA CTG ATG AAG TCA GGG CCG ACC GTG GAC TGT GCC ACA 
Callorhinus_ursinus             ATG GTG GGG CCG ACA GCC TCG GAC GTG CCC CCG ACG ATG CCG GTC AAG ATC TTC TCA GCT GGC GTG GCG GCC TGT GTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACG GCC AAA GTC CGG CTC CAG ATC CAA GGT GAA TGC CAG ACC TCT AGA GCC ATT AGG TAT AAA GGT GTC CTG GGT ACA GTC ACC ACT CTG GCA AAA ACT GAA GGG CCA ATG AAA CTC TAT AGT GGG CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCC TCT TTT AGG ATC GGC CTC TAT GAC ACC GTC CAG GAG TTC TTC AGC ACA GGG AAA CAA ACA GCT AGT TTA GGA AGC AAG ATC GCA GCT GGT CTG ACA ACT GGA GGA GTG GCA GTG TTC ATC GGG CAA CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAT CTG CAT GGT CTC AAA CCT CGC TAC ACT GGG ACT TAC AAT GCT TAC AGA ATC ATA GCG ACA ACG GAA GGC CTG ACA GGC CTT TGG AAA GGG ACT ACT CCC AAT CTG ACA AGA AAT GTC ATC ATC AAT TGT ACA GAG CTA GTT ACA TAC GAC CTA ATG AAG GAG GCC CTT GTG AAA AAG AAG CTC CTA GCA GAC GAC TCA CCC TGC CAC TTT GTG TCA GCT CTT ATC GCT GGA TTT TGC ACA ACA GTC CTG TCC TCA CCA GTG GAT GTG GTA AAA ACC CGA TTT GTT AAT TCT CCA CCA GGA CAG TAC ACG AGT GTG CCC AAC TGT GCC ATG ACA ATG CTC ACT AAG GAA GGA CCG TTG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA CTC GGA TCC TGG AAC GTC ATT ATG TTT GTG TGC TTC GAA CAG CTG AAA CGA GAA CTG ATG AAG TCA GGG CAG ACT GTG AAC TGT GCC ACA 
Heterocephalus_glaber           ATG GTG AGC CCG ACG GCG TCG GAG GTG CAC CCC ACC ATG GGG GTC AAG ATC TTC TCC GCC GGA GTG GCG GCC TGT TTG GCC GAT GTG ATC ACC TTT CCG CTG GAC ACG GCC AAA GTC CGC CTG CAG ATT CAA GGC GAA AGC CAG ATC TCC AGC GGT ATT CAG TAT AAA GGT GCC CTG GGA ACT ATC ACC ACT CTG GCA AAG ACC GAA GGG CCC ATG AAA CTA TAC AGC GGG CTG CCC GCG GGC CTG CAG AGG CAA ATA AGC TTC GCC TCT CTC AGG ATC GGC CTC TAT GAC ACG GTC CAG GAG TTC TAC ACC TCG GAG AAA GAT ATA CCT AGT TTG GGA AGT AGG ATC GCA GCT GGC TTA ACC ACT GGA GGA GTG GCT GTA TTC ATC GGG CAG CCC ACA GAG GTC GTG AAA GTC AGA CTC CAA GCA CAG AGC CAA CTA CAT GGC CTC AAA CCA CGC TAC ACT GGG ACT TAC AAT GCT TAC CGA ATT ATA GCA ACA ACA GAA AGC TTG AAA AGT CTT TGG AAA GGG ACT ACT CCC AAT CTA TTG AGA AAT ATT ATC ATC AAT TGC ACG GAG CTA GTA ACA TAT GAC CTG ATG AAG GGT GCC CTT GTG AGA AAC AAG ATA CTA GCA GAT GAC GTC CCC TGC CAC TTA CTG TCT GCT CTT ATC GCT GGG TTT TGC ACA ACG CTT CTG TCC TCT CCA GTG GAT GTG GTG AAA ACT AGA TTT ATT AAT TCT CCA CCA GGA CAG TAC ATA AGT GTG CCC AGC TGT GCA ATG ACC ATG CTC AAA AAG GAA CGA TGG ACA GCT TTT TTC AAA GGA TTT GTG CCT TCG TTC CTG CGA CTT GCA TCC TGG AAT GTT ATT ATG TTT GTG TGC TTT GAG CAA CTG AAG CGT GAG TTG ACG AAG TCA AGG CAG CCC ACA GAC TAC GCC ACA 
Homo_sapiens                    ATG GGG GGC CTG ACA GCC TCG GAC GTA CAC CCG ACC CTG GGG GTC CAG CTC TTC TCA GCT GGA ATA GCG GCG TGC TTG GCG GAC GTG ATC ACC TTC CCG CTG GAC ACG GCC AAA GTC CGG CTC CAG GTC CAA GGT GAA TGC CCG ACG TCC AGT GTT ATT AGG TAT AAA GGT GTC CTG GGA ACA ATC ACC GCT GTG GTA AAA ACA GAA GGG CGG ATG AAA CTC TAC AGC GGG CTG CCT GCG GGG CTT CAG CGG CAA ATC AGC TCC GCC TCT CTC AGG ATC GGC CTC TAC GAC ACG GTC CAG GAG TTC CTC ACC GCA GGG AAA GAA ACA CCT AGT TTA GGA AGC AAG ATT TTA GCT GGT CTA ACG ACT GGA GGA GTG GCA GTA TTC ATT GGG CAA CCC ACA GAG GTC GTG AAA GTC AGA CTT CAA GCA CAG AGC CAT CTC CAC GGA ATC AAA CCT CGC TAC ACG GGG ACT TAT AAT GCG TAC AGA ATA ATA GCA ACA ACC GAA GGC TTG ACG GGT CTT TGG AAA GGG ACT ACT CCC AAT CTG ATG AGA AGT GTC ATC ATC AAT TGT ACA GAG CTA GTA ACA TAT GAT CTA ATG AAG GAG GCC TTT GTG AAA AAC AAC ATA TTA GCA GAT GAC GTC CCC TGC CAC TTG GTG TCG GCT CTT ATC GCT GGA TTT TGC GCA ACA GCT ATG TCC TCC CCG GTG GAT GTA GTA AAA ACC AGA TTT ATT AAT TCT CCA CCA GGA CAG TAC AAA AGT GTG CCC AAC TGT GCA ATG AAA GTG TTC ACT AAC GAA GGA CCA ACG GCT TTC TTC AAG GGG TTG GTA CCT TCC TTC TTG CGA CTT GGA TCC TGG AAC GTC ATT ATG TTT GTG TGC TTT GAA CAA CTG AAA CGA GAA CTG TCA AAG TCA AGG CAG ACT ATG GAC TGT GCC ACA 
Lemmus_lemmus                   ATG GTG AGC CCG ACA ACT TCC GAA GTG CAC CCC ACC ATG GGG GTC AAG ATC TTC TCA GCT GGC ATA TCC GCC TGC CTG GCA GAT ATC ATC ACC TTC CCG TTG GAC ACA GCC AAA GTC CGG CTT CAG GTA GAG GGT GAA GGC CAG ACC TCC AGT ACC ATT AGG TAT AAA GGT GTC CTG GGA ACC ATC ACT ACC CTG GCA AAA ACA GAA GGG TTG CCG AAA CTG TAC AGC GGT CTG CCT GCT GGC ATT CAA AGG CAA ATC AGC TTC GCC TCA CTC AGG ATT GGT CTC TAT GAT ACT GTC CAA GAG TAC TTC TCT TCA GGA AAA GAA ACT CCC ACT TTG GGA AAC AGG ATC TCA GCT GGC TTA ATG ACT GGA GGT GTG GCA GTA TTC ATC GGG CAA CCT ACC GAG GTG GTG AAA GTC AGA CTC CAA GCA CAG AGC CAC TTA CAC GGG ATC AAA CCC CGC TAC ACA GGG ACC TAC AAT GCT TAC AGA ATT ATA GCC ACA ACA GAA AGC TTG TCA ACA CTC TGG AAA GGG ACG ACC CCT AAT CTG ATG AGA AAT GTC ATT ATC AAT TGT ACA GAG CTG GTA ACC TAT GAC CTC ATG AAG GGG GCC CTT GTG AAC AAC CAA ATA CTC GCA GAT GAC GTG CCA TGC CAT TTA CTG TCA GCT CTT GTT GCC GGG TTT TGC ACC ACC CTC CTG GCC TCT CCG GCG GAT GTG GTG AAA ACA AGA TTC ATC AAC TCC CTA CCA GGA CAG TAC CCG AGT GTG CCC AGC TGT GCA ATG GCC ATG CTC ACC AAG GAA GGA CCG ACG GCT TTT TTC AAA GGG TTT GTG CCT TCT TTC CTG CGA CTG GCG TCC TGG AAT GTC ATC ATG TTT GTG TGC TTT GAA CAG CTG AAG AAG GAA TTG ATG AAG TCA AGG CAG ACG GTG GAC TGC ACC ACA 
Microtus_ochrogaster            ATG GTG AGC CCA ACA ACT TCC GAA GTG CAC CCC ACC ATG GGG GTC AAG ATC TTC TCA GCT GGC ATA TCC GCC TGC CTG GCA GAT ATC ATC ACC TTT CCA CTG GAC ACA GCC AAA GTC CGG CTT CAG ATC CAA GGT GAA GGC CAG ACC TCC ACT ACC ATT AGG TAT AAA GGT GTC CTG GGA ACC ATC ACC ACC CTG GCA AAA ACA GAA GGG TTG CCG AAA CTG TAC AGC GGT CTG CCT GCT GGC ATT CAG AGG CAA ATC AGC TTC GCC TCA CTC AGG ATC GGT CTC TAT GAT ACT GTT CAA GAG TAC TTC TCT TCA GGC AAA GAA ACG CCC ACT TTG GGA AAC AGG ATC TCA GCT GGC TTA TTG ACT GGA GGT GTG GCA GTA TTC ATC GGG CAA CCT ACC GAG GTC GTG AAA GTC AGA CTC CAA GCA CAG AGT CAC TTA CAC GGG ATC AAA CCC CGC TAC ACA GGG ACC TAC AAT GCT TAC AGA ATT ATA GCC ACA ACA GAA AGC TTT TCA ACC CTC TGG AAA GGG ACA ACC CCT AAT CTG ATG AGA AAT GTA ATT ATC AAT TGT ACA GAG CTG GTA ACA TAT GAC CTC ATG AAG GGG GCC CTT GTG AAC AAC CAA ATA CTG GCA GAC GAC GTG CCC TGC CAT TTA CTG TCA GCT CTT GTG GCC GGG TTT TGC ACC ACC TTC CTG GCC TCT CCG GCA GAT GTG GTA AAA ACA AGA TTC ATC AAC TCT CTA CCA GGA CAG TAC CCG AGT GTA CCC AGC TGT GCT ATG ACC ATG CTC ACC AAG GAA GGA CCA ACG GCT TTT TTC AAA GGG TTT GTG CCT TCT TTC CTG CGA CTG GCG TCC TGG AAT GTC ATC ATG TTT GTG TGC TTC GAA CAG CTG AAG AAG GAA TTG ATG AAG TCC AGG CAG ACG GTG GAC TGC ACC ACA 
Mus_musculus                    ATG GTG AAC CCG ACA ACT TCC GAA GTG CAA CCC ACC ATG GGG GTC AAG ATC TTC TCA GCC GGA GTT TCA GCT TGC CTG GCA GAT ATC ATC ACC TTC CCG CTG GAC ACT GCC AAA GTC CGC CTT CAG ATC CAA GGT GAA GGC CAG GCT TCC AGT ACC ATT AGG TAT AAA GGT GTC CTA GGG ACC ATC ACC ACC CTG GCA AAA ACA GAA GGA TTG CCG AAA CTG TAC AGC GGT CTG CCT GCG GGC ATT CAG AGG CAA ATC AGC TTT GCC TCA CTC AGG ATT GGC CTC TAC GAC TCA GTC CAA GAG TAC TTC TCT TCA GGG AGA GAA ACA GCC TCT CTC GGA AAC AAG ATC TCA GCC GGC TTA ATG ACT GGA GGT GTG GCA GTG TTC ATT GGG CAG CCT ACA GAG GTC GTG AAG GTC AGA ATG CAA GCC CAG AGC CAT CTG CAT GGG ATC AAA CCC CGC TAC ACG GGG ACC TAC AAT GCT TAC AGA GTT ATA GCC ACC ACA GAA AGC TTG TCA ACA CTT TGG AAA GGG ACG ACC CCT AAT CTA ATG AGA AAT GTC ATC ATC AAT TGT ACA GAG CTG GTA ACA TAT GAC CTC ATG AAG GGG GCC CTT GTA AAC AAC AAA ATA CTG GCA GAT GAC GTC CCC TGC CAT TTA CTG TCA GCT CTT GTT GCC GGG TTT TGC ACC ACA CTC CTG GCC TCT CCA GTG GAT GTG GTA AAA ACA AGA TTC ATC AAC TCT CTG CCA GGA CAG TAC CCA AGC GTA CCA AGC TGT GCG ATG TCC ATG TAC ACC AAG GAA GGA CCG ACG GCC TTT TTC AAA GGG TTT GTG GCT TCT TTT CTG CGA CTC GGG TCC TGG AAC GTC ATC ATG TTT GTG TGC TTT GAA CAG CTG AAA AAA GAG CTG ATG AAG TCC AGA CAG ACA GTG GAT TGT ACC ACA 
Mustela_erminea                 ATG GTG GGC CCC ACA GCC TTG GAC GTG CCC CCG ACG ATG ACG GTC AAG ATC TTC TCC GCT GGC GTG GCT GCC TGT GTG GCG GAT GCC ATC ACG TTC CCG CTG GAC ACC GTC AAA GTC CGG CTC CAG ATC CAA GGT GAA TGC CAG ACC TCC AGA GCC ATC AGG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACT CTG GCA AAA ACA GAA GGG CCA GTG AAA CTC TAT AGT GGG CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCT TCT CTT CGG ATC GGC CTC TAC GAC ACT GTC CAG GAG TTC TTC AGC GCA GGA AAA GAA ACA CCT AGT TTA GGA AGC AAG ATC TCA GCT GGT CTG ACG ACT GGA GGG GTG GCA GTA TTC ATC GGG CAA CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAT CTG CAT GGT CTC AAA CCT CGC TAC ACC GGG ACT TAC AAT GCT TAC AGA GTC ATA GCG ACA ACA GAA GGC CTG ATG GGC CTT TGG AAA GGA ACT ACT CTC AAT CTG ACA AGA AAT GTC ATC ATT AAT TGT ACA GAG CTG GTT ACA TAT GAC CTA ATG AAG GAA GGC CTT GTG AAA AAC AAA CTC CTG GCA GAT GAC TTA CCC TGC CAC TGT GTG TCA GCC CTT ATC GCC GGA TTT TGC ACA ACG GTC CTG TGC TCG CCA GTG GAT GTG GTA AAA ACC CGA TTC ATT AAT TCT CCA CCA GGC CAG TAC AAA AGT GTG CCC AAC TGT GCC ATG ACA ATG TTC ACC AAG GAA GGA CCG CCG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA TTC GGA TCC TGG AAC GTC ATC ATG TTT GTG TGC TTC GAA CAG CTG AAA CGA GAG CTG ACG AAG TCA GGG CGG ACC GTG GAC TGT GCC ACA 
Mustela_putorius_furo           ATG GTG GGC CCC ACA GCC TTG GAC GTG CCC CCG ACG ATG ACG GTC AAG ATC TTC TCC GCT GGC GTG GCT GCC TGT GTG GCG GAT GCC ATC ACG TTC CCG CTG GAC ACC GTC AAA GTC CGG CTC CAG ATC CAA GGT GAA TGC CAG ACC TCC AGA GCC ATC AGG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACT CTG GCA AAA ACA GAA GGG CCA GTG AAA CTC TAT AGT GGG CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCT TCT CTT CGG ATC GGC CTC TAC GAC ACT GTC CAG GAG TTC TTC AGC GCG GGA AAA GAA ACA CCT AGT TTA GGA AGC AAG ATC TCA GCT GGT CTG ACG ACT GGA GGG GTG GCA GTA TTC ATC GGG CAA CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAT CTG CAT GGT CTC AAG CCT CGC TAC ACC GGG ACT TAC AAT GCT TAC AGA GTC ATA GCG ACA ACA GAA GGC CTG ATG GGC CTT TGG AAA GGA ACT ACT GTC AAT CTG ACA AGA AAT GTC ATC ATT AAT TGT ACA GAG CTG GTT ACA TAT GAC CTA ATG AAG GAA GGC CTT GTG AAA AAC AAA CTC CTG GCA GAT GAC TTA CCC TGC CAC TGT GTG TCA GCC CTT ATC GCC GGA TTT TGC ACA ACG GTC TTG TGC TCG CCA GTG GAT GTG GTA AAA ACC CGA TTC ATT AAT TCT CCA CCA GGC CAG TAC ACA AGT GTG CCC AAC TGC GCC ATG ACA ATG TTC ACC AAG GAA GGA CCG CTG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA TTC GGA TCC TGG AAC GTC ATC ATG TTT GTG TGC TTC GAA CAG CTG AAG CGA GAA CTG ACA AAG TCA AGG CGG ACC GTG GAC TGT GCC ACA 
Myodes_glareolus                ATG GTG AGC CAG ACA ACT TCC GAA GTG CAC CCC ACC ATG GGG GTC AAG ATC TTC TCA GCT GGC ATA TCT GCC TGC CTG GCA GAT ATC ATC ACC TTC CCG TTG GAC ACA GCC AAA GTC CGG CTT CAG ATC CAA GGT GAA GGC CAG ACC TCC AGT ACC ATT AGG TAT AAA GGT GTC CTG GGA ACC ATC ACC ACC CTG GCA AAA ACA GAG GGG TGG CAG AAA CTG TAC AGC GGT CTG CCC GCT GGC ATT CAG AGG CAA ATC AGC TTC GCC TCC CTC AGG ATT GGT CTC TAT GAT ACT GTC CAA GAG TAC TTC TCT TCA GGG AAA GAA ACG CCC ACT TTG GGA AAC AGG ATC TCA GCT GGC TTA ATG ACA GGA GGT GTG GCA GTA TTC ATC GGG CAA CCT ACC GAG GTT GTG AAA GTC AGA CTC CAA GCA CAG AGC CAC TTA CAC GGG ATC AAA CCC CGC TAC ACA GGG ACC TAC AAT GCT TAC AGA ATT ATA GCC ACG ACA GAA AGC TTG TCA ACC CTC TGG AAA GGG ACG ACC CCT AAT CTG ATG AGA AAT GTT ATT ATC AAT TGT ACA GAG CTG GTA ACA TAT GAC CTC ATG AAG GGA GCC CTT GTG AAC AAC CAA ATA CTG GCA GAC GAC GTG CCA TGT CAT TTA CTG TCA GCG CTT GTG GCC GGG TTT TGC ACC ACC TTC CTG GCC TCT CCG GCG GAC GTG GTA AAA ACA AGA TTC ATC AAC TCT CTA CCA GGA CAG TAC CCG AGT GTA CCC AGC TGT GCA ATG ACC ATG CTC ACC AAG GAA GGA CCA ACG GCT TTT TTC AAA GGG TTT GTG CCT TCT TTC CTG AGA CTG GCG TCC TGG AAT GTC ATC ATG TTT GTG TGC TTC GAA CAG CTG AAG AAG GAA TTG ATG AAG TCA AGG CAG ACG GTG GAC TGC ACC ACA 
Neovison_vison                  ATG GTG GGC CCC ACA GCC TTG GAC GTG CCC CCG ACG ATG ACG GTC AAG ATC TTC TCC GCT GGC GTG GCG GCC TGT GTG GCG GAT GCC ATC ACG TTC CCG CTG GAC ACC GTC AAA GTC CGG CTC CAG ATC CAA GGT GAA CGC CAG ACC TCC AGA GCC ATC AGG TAT AAA GGT GTC CTG GGA ACA ATC ACC ACT CTG GCA AAA ACA GAA GGG CCA GTG AAA CTC TAT AGT GGG CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCT TCT CTT CGG ATC GGC CTC TAC GAC ACC GTC CAG GAG TTC TTC AGC ACA GGA AAA GAA ACA CCT AGT TTA GGA AGC AAG ATC TCA GCT GGT CTG ACG ACT GGA GGG GTG GCA GTA TTC ATC GGG CAA CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAT CTG CAT GGT CTC AAA CCT CGC TAC ACC GGG ACT TAC AAT GCT TAC AGA GTC ATA GCG ACA ACA GAA GGC CTG ATA GGC CTT TGG AAA GGA ACT ACT CTC AAT CTG ACA AGA AAC GTC ATC ATT AAT TGT ACA GAG CTG GTT ACA TAT GAC CTA ATG AAG GAA GGC CTT GTG AAA AAC AAA CTC CTG GCA GAT GAC TTA CCC TGC CAC TTT GTG TCA GCC CTT ATC GCC GGA TTT TGC ACA ACG GTC CTG TGC TCG CCA GTG GAT GTG GTA AAA ACC CGA TTC ATT AAT TCT CCA CCA GGC CAG TAC ACA AGT GTG CCC AAC TGC GCC ATG ACA ATG TTC ACC AAG GAA GGA CCG CTG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA TTC GGA TCC TGG AAC GTC ATC ATG TTT GTG TGC TTC GAA CAG CTG AAG CGA GAA CTG ATG AAG TCA GGG CGG ACC GTG GAC TGT GCC ACA 
Ochotona_princeps               ATG GTG GGC ACC ACA GCC ACG GAC GTG CCC CCC ACC ATG GGG GTC AAG ATC TTC TCA GCT GGA GTG GCG GCC TGC CTG GCG GAT GTG ATC ACC TTT CCG CTG GAC ACA GCA AAA GTC CGC CTA CAG ATC CAA GGC GAG TGT CAG ACC ACC AGC GGC ATC AGG TAC AAA GGT GTT CTG GGT ACC ATC ACC ACA CTG GCA AAA ACG GAA GGG CCG CTG AAG CTC TAC AGC GGG CTG CCT GCC GGC CTC CAG AGA CAG ATC AGC TTC GCC TCG CTC AGG ATT GGC CTC TAC GAC ACA GTG CAG GAG TTC TGG GGA GGG GAG GAA GTT GAC TCT AGC CAG TTA AGC AAG ATC TGT GCT GGT CTA ACG ACT GGA GGA GTG GCC GTG TTC ATC GGG CAA CCC ACA GAG GTT GTG AAA GTC CGA CTC CAG GCG CAG AGC CAC CTG CAT GGT CTC AAA CCT CGC TAC ACG GGG ACT TAC AAT GCT TAC AGA ATT ATA GCC ACA ACT GAG AGC TTG TCC ACT CTG TGG AAA GGG ACT ACT CCT AAT CTG TTA AGG AAT ATT ATC ATT AAT TGT ACA GAG CTC GTA ACC TAC GAC CTA ATG AAG GGG GCC CTT GTG AGA AAT GAC ATA CTA GCA GAT GAT GTT CCC TGC CAC TTG CTG TCG GCG CTT ATT GCT GGA TTT TGC ACA ACG CTT CTG TCC TCT CCA GTG GAT GTG GTG AAA ACC AGA TTT ATT AAC TCT CCC CAA GGC CAG TAC ACA AGT GTG CCC AGC TGT GCA ATG TCA ATG TTA ACT AAG GAA GGA CCG ACT GCT TTT TTC AAA GGA TTT GCA CCT TCC TTT CTG CGA CTC GCC TCG TGG AAT GTC ATC ATG TTT GTG AGC TTT GAA AAG CTG AAG CGT GAA CTG ATG AAG TCC AGG CAG ACG GTG GAC TGT GCC ACA 
Oryctolagus_cuniculus           ATG GTG GGC ACC ACG ACC ACG GAC GTG CCC CCA ACC ATG GGG GTC AAG ATC TTC TCA GCT GGA GTG GCA GCC TGC CTG GCG GAC GTG ATC ACC TTT CCG CTG GAC ACC GCC AAA GTC CGG CAA CAG ATC CAA GGC GAG TTC CCG ATC ACC AGC GGC ATC AGG TAC AAA GGT GTC CTG GGG ACA ATC ACC ACC CTG GCA AAA ACG GAA GGG CCC CTG AAA CTC TAC AGC GGG TTG CCC GCC GGC CTC CAG AGA CAA ATC AGC TTC GCC TCG CTC AGG ATC GGC CTC TAC GAC ACG GTG CAG GAG TTC TTC ACC TCG GGG GAA GAA ACA CCG AGT TTA GGA AGC AAG ATC TCG GCC GGC CTA ACA ACT GGA GGC GTG GCG GTG TTC ATC GGG CAG CCC ACA GAG GTC GTG AAA GTC AGG CTG CAA GCG CAG AGC CAC CTG CAC GGT CTC AAG CCT CGC TAC ACG GGG ACG TAC AAT GCC TAC AGG ATT ATA GCT ACA ACT GAG AGC TTG ACC AGT CTG TGG AAA GGG ACA ACT CCT AAT CTG TTA AGG AAT GTC ATT ATT AAC TGT ACA GAG CTC GTA ACC TAC GAC CTA ATG AAG GGG GCC CTT GTG AGA AAC GAA ATA CTA GCA GAT GAT GTT CCC TGC CAC TTC GTG TCA GCT CTT ATC GCT GGA TTT TGC ACA ACG CTT CTG TCC TCT CCA GTG GAT GTG GTG AAA ACC AGA TTT ATT AAC TCT CCA CCG GGA CAA TAT GCG AGT GTG CCC AAC TGT GCA ATG ACA ATG TTC ACT AAG GAA GGA CCA ACG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC CTG CGA CTC GGA TCA TGG AAC GTC ATC ATG TTC GTG TGC TTT GAA AAG CTG AAA GGA GAA CTC ATG AGG TCA AGG CAG ACT GTG GAC TGT GCC ACA 
Phoca_vitulina                  ATG GCG GGC CCG ACA GCC TCG GAC GTG CCC CCG ACG ATG CCG GTC AAG ATC TTC TCA GCT GGC GTG GCG GCC TGT GTG GCG GAT GTG ATC ACC TTC CCG CTG GAC ACG GCC AAA GTT CGG CTC CAG ATC CAA GGT GAA TGC CAG ACC TCC AGA GCC ATT AGG TAT AAA GGT GTC CTG GGT ACA GTC ACC ACT CTG GCA AAA ACT GAA GGG CCA ATG AAA CTC TAT AGT GGG CTG CCT GCT GGT CTC CAG AGA CAA ATA AGC TTT GCC TCT CTT AGG ATC GGC CTC TAC GAC ACC GTC CTG GAG TTC TTC AGC ACA GGG AAA GAA ACA GCT GGT TTA GGC AGC AAG ATC GCA GCT GGT CTG ACG ACT GGA GGA GTG GCA GTA TTC ATC GGG CAA CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAC CTG CAT GGT CTC AAA CCT CGC TAC ACT GGG ACT TAC AAC GCT TAC AGA ATC ATA GCG ACA ACG GAA GGC CTG ACA GGC CTT TGG AAA GGG ACT ACT CCC AAT CTG ACA AGA AAT GTC ATC ATC AAT TGT ACA GAG CTA GTT ACA TAC GAC CTA ATG AAG GAG GCC CTT GTG AAA AAG AAA CTC CTA GCA GAC GAC TTA CCC TGC CAC TTC GTG TCA GCT CTT ATC GCT GGA TTT TGC ACA ACA GTC CTG TCC TCG CCA GTG GAT GTG GTA AAA ACC CGA TTT GTT AAT TCT CCA CCA GGA CAG TAC ACG AGT GTG CCC AAC TGT GCC ATG ACA ATG CTC ACT AAG GAA GGA CCG TTG GCT TTT TTC AAA GGA TTT GTA CCT TCC TTC TTG CGA CTC GGA TCC TGG AAC GTC ATT ATG TTT GTG TGC TTC GAA CAG CTG AAA CGA GAA CTG ATG AAG TCA GGG CAG ACC GTG AAC TGT GCC ACA 
Pteropus_vampyrus               ATG ATG GGC CCC ACG ACC TCG GAC GTG CAC CCG ACC ATG GCG GTC AAG ATC TTC TCC GCC GGA GTG GCA GCC TGT GTG GCA GAT GCG ATC ACC TTC CCG CTG GAC ACA GCC AAA GTC CGG CTC CAG ATC CAA GGT GAA TGC CAG ACC TCT AGT GCC ATC AGG TAT AAA GGC GTC CTG GGA ACC ATC ACC ACT CTG GCC AGA ACA GAA GGG CCC ATG AAG CTC TAC GGC GGG CTG CCT GCT GGC CTC CAA AGA CAA ATA AGC TCC GCC TCC CTT CGG ATC GGG CTC TAT GAC ACC TGC CAG GAA TTC TTC GCC ACA GGG AAA GAA ACC --- AGT TTA GGA AGC AAG ATC TCA GCT GGC CTA ACG ACT GGA GCA GTG GCA GTA TTC ATT GGG CAG CCC ACA GAG GTC GTG AAG GTC AGA CTT CAA GCA CAG AGC CAT CTA CAT GGC CTC AAA CCT CGC TAC ACT GGG ACC TAC AAT GCT TAC AGA ATT ATA GCA ACA ACG GAA GGC TTG ACA GGT CTT TGG AAA GGG ACT ACT CTC AAT CTG TTA AGA AGT ATC ATC ATC AAT TGT ACA GAG CTA GTA ACG TAC GAC CTA ATG AAG GAA GCC CTT GTG AAA AAC AAA CTA CTA GCA GAC GAC GTA CCC TGC CAC GTC ATG TCG GCC ATC ATC GCC GGA TTT TGC GCA ACG GTT CTG TCC TCT CCA GTG GAT GTG GTG AAA ACC AGG TTC ATC AAC TCT CCA CCA GGA CAG TAC ACA AGC ATG CCC AAC TGC GCG ATG ACA ATG CTC ACT AAG GAA GGA CCG TCG GCG TTT TTC AAA GGA TTA GTA CCT GCC TTC CTG CGA CTC GGA TCC TGG AAT GTC GTC ATG TTT GTG TGC TTT GAA CAG CTG AAA AGA GAG CTG ACG AGG TCG CGG CAG ACC GTG GAC TGT GCC ACA 
Rattus_norvegicus               ATG GTG AGT TCG ACA ACT TCC GAA GTG CAA CCC ACC ATG GGG GTC AAG ATC TTC TCA GCC GGC GTT TCT GCC TGC CTA GCA GAC ATC ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGC CTT CAG ATC CAA GGT GAA GGC CAG GCT TCC AGT ACT ATT AGG TAT AAA GGT GTC TTA GGG ACC ATC ACC ACC CTG GCC AAG ACA GAA GGA TTG CCG AAA CTG TAC AGC GGT CTG CCT GCT GGC ATC CAG AGG CAA ATC AGC TTT GCT TCC CTC AGG ATT GGC CTC TAC GAT ACG GTC CAA GAG TAC TTC TCT TCA GGG AGA GAA ACG GCC TCT TTG GGA AGC AAG ATC TCG GCT GGC TTG ATG ACG GGT GGC GTG GCG GTA TTC ATT GGG CAG CCC ACA GAG GTG GTG AAG GTC AGA ATG CAA GCA CAA AGC CAT CTG CAC GGG ATC AAA CCC CGC TAC ACT GGG ACC TAC AAT GCT TAC AGA GTT ATA GCC ACC ACA GAA AGC TTG TCA ACA CTG TGG AAA GGG ACG ACT CCT AAT CTA ATG AGA AAT GTC ATC ATC AAC TGT ACA GAG CTG GTG ACA TAT GAC CTC ATG AAG GGG GCC CTT GTG AAC CAC CAC ATA CTG GCA GAT GAC GTC CCC TGC CAT TTA CTG TCA GCT CTT GTC GCC GGG TTT TGC ACC ACA CTC CTG GCC TCT CCG GTG GAT GTG GTA AAA ACG AGA TTC ATC AAC TCT CTA CCA GGA CAG TAC CCA AGT GTA CCC AGC TGT GCA ATG ACC ATG TAC ACC AAG GAA GGA CCG GCA GCC TTT TTC AAA GGG TTT GCG CCT TCT TTT CTG CGA CTC GGA TCC TGG AAC GTC ATC ATG TTT GTG TGC TTT GAA CAG CTG AAG AAA GAG CTG ATG AAG TCC CGG CAG ACA GTG GAC TGC ACC ACA 
Sorex_araneus                   ATG GTG GCC CAC GCA GCC GAC GAC GTG CAC CCC ACC ATG CCC ATG AGG ATC TTC TCC GCC GGG GTG TCC GCC TGC GTG GCT GAC ATC ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTG CAG GTG CAA GGA GAA AGC CCC AAC GCC CCT GGC ATT AAG TAC AAA GGG GTG CTG GGA ACC ATC GCC ACG GTG GCC AAG ACA GAG GGA CCC CTG AAA CTC TAC GGG GGG CTC CCC GCG GGC ATC CAG AGG CAG ATC AGC TCT GCC TCG CTC CGC ATC GGC CTC TAC GAC ACG ATG CAG GAA TAC TTC GAC GTC CAC AAA GAG ACC GCA ACC TTA GGG AAC AAG ATC ATG GCT GGC CTC ATG ACC GGC GGT ATG GCG GTT CTC ATC GGG CAG CCC ACC GAG GTG GCC AAG GTC AGG ATG CAG GCA CAG AGC AAA CTG CAC TGG TTC AAG CCC CGT TAC ACG GGG ACG TAC AAC GCC TAC TAC GTG ATC GTG ACC ACG GAG GGC CTC CTT GGG CTG TGG AAA GGG ACA AGT CTC AAC CTG ACA AGG AAC GTC ATC ATC AAT TGC ACG GAG CTG GTG GTA TAC GAC GTC CTC AAG GAG GCC CTG GTG AAG AAC AAC CTG CTA GCA GAT GAC GTG CCT TGC CAC TTC GTG TCG GCG CTG GTG GCT GGG TTT TGC ACG ACG GCG CTG TCT TCT CCC GTG GAT GTG GTG AAA ACT AGG TTC ATC AAC TCC CCG CCG GGC CAC TAC CCG AGC GTG CAC AGC TGT GCC CTC AAC ATG CTC AGG AAG GAA GGC CCC TCG GCT TTC TTC AAA GGA TTT GTG CCC TCC TTC CTG CGG CTG GGG TCC TGG ACC GTC ATC ATG TAC GTG TGC TTC GAA CAG CTG AAG AAA GAA CTT GCC AAG TCC AGG CAG ACC GTG GAC TGC AGC ACA 
Talpa_europaea                  ATG GTC GCC TCC ACC GCC CCG GAC CAG GCC CCC ACC ATG CCC ATC AAG ATC GTC TCT GCA GGG CTG GCA GCC TGC ACC GCG GAT GTG ATC ACC TTC CCG CTG GAC ACC GCC AAA GTC CGG CTC CAG ATT CAA GGC GAA ACC CCG ATC TCC AGT GGC ATC AGG TAT AAA GGC GTC CTG GGC ACC ATC ACC ACC CTG ATC AAG ACG GAG GGG CCC ATG AAG CTC TAC AGC GGG CTG CCC GCG GGC ATC CAG AGG CAG ATC AGC TTC GCC TCT CTG AGG ATC GGC CTC TAC GAC TCC GTG CAG GAG TTC TTC AGC TCG GGC ACG GAC GGC CCC ACT CTG GGA AGC AAG ATC TCC GCA GGC CTG ACG ACT GGC GGC GTG GCC GTG TTC ATC GGG CAG CCC ACG GAG GTG GCG AAG GTC AGG ATG CAA GCC CAG AGC CAC CTG CAC GGC CTC AAG CCC CGC TAC ACC GGC ACC TAC AAC GCT TAC AGA GTC ATA GCC ACC ACG GAA GGC TTC CTG GGG CTT TGG AAA GGG ACC AGT CTC AAC CTG ACA AGG AAT GTG ATC ATC AAC TGC ACA GAG CTG GTG ATG TAT GAC CTG ATG AAG GAG GCC CTT GTG AAG AAC AAG GTG CTA GCA GAT GAC GTC CCC TGC CAC GTC GTG TCG GCT CTC GTC GCT GGA TTT TGC ACG ACG GCG CTG GCT TCC CCG GTG GAC GTG GTG AAG ACC AGA TTC ATC AAT TCT CCC CCG GGA CAG TAC CCG CAC GTG CAC AGC TGC GCG CTG GCC ATG CTG CAC AAG GAA GGG CTG TCG GCT TTC TTC AAA GGG TTC GTG CCG TCC TTC CTG CGG CTG GGC TCC TGG ACC GTC ATC ATG TTC GTG TGC TTT GAG CGG CTG AAG CGC GAG CTG ATG AAG TCC AGG CAG ACG GTG GAC TGT GCC ACA 
Talpa_occidentalis              ATG GTC GCC TCC ACC GCC CCA GAC CAG GCC CCC ACC ATG CCC ATC AAG ATC TTC TCC GCA GGG CTG GCG GCC TGC ACC GCG GAT GTG ATC ACC TTC CCT CTG GAC ACC GCC AAA GTC CGG CTC CAG ATT CAA GGC GAA ACC CCG ATC TCC AGT GGC ATC AGG TAT AAA GGC GTC CTG GGC ACC ATC ACC ACC CTG ATC AAG ACG GAG GGG CCC ATG AAG CTC TAC AGC GGG CTG CCC GCG GGC ATC CAG AGG CAG ATC AGC TTC GCC TCT CTG AGG ATC GGC CTC TAC GAC TCC GTG CAG GAG TTC TTC AGC TCG GGC ACG GAC GGC CCC ACT CTG GGA AGC AAG ATC TCC GCA GGC CTG ACG ACT GGC GGC GTG GCC GTG TTC ATC GGG CAG CCC ACG GAG GTG GCG AAG GTC AGG ATG CAA GCC CAG AGC CAC CTG CAC GGC CTC AAG CCC CGC TAC ACC GGC ACC TAC AAC GCT TAC AGA GTC ATA GCC ACC ACG GAA GGC TTC CTG GGG CTT TGG AAA GGG ACC AGT CTC AAC CTG ACA AGG AAT GTG ATC ATC AAC TGC ACA GAG CTG GTG ATG TAT GAC CTG ATG AAG GAG GCC CTT GTG AAG AAC AAG GTG CTA GCA GAT GAC GTC CCC TGC CAC GTC GTG TCG GCT CTC GTC GCT GGG TTT TGC ACG ACG GCG CTG GCT TCC CCG GTG GAC GTG GTG AAG ACC AGA TTC ATC AAT TCT CCC CCG GGA CAG TAC CCG CAC GTG CAC AGC TGC GCG CTG GCC ATG CTG CAC AAG GAA GGG CTG TCG GCT TTC TTC AAA GGG TTC GTG CCG TCC TTC CTG CGG CTG GGC TCC TGG ACC GTC ATC ATG TTC GTG TGC TTT GAG CGG CTG AAG CGC GAG CTG ATG AAG TCC AGG CAG ACG GTG GAC TGT GCC ACA 



Printing out site pattern counts


        29        903  P

Antrozous_pallidus               --- AAA AAA AAA AAA AAA AAA AAA AAC AAC AAC AAC AAC AAG AAG AAG AAG AAG AAG AAG AAG AAG AAG AAT AAT AAT AAT AAT AAT ACA ACA ACA ACA ACA ACA ACA ACC ACC ACC ACC ACC ACC ACC ACG ACG ACG ACG ACG ACG ACT ACT ACT ACT ACT AGA AGA AGA AGA AGA AGA AGA AGC AGG AGG AGT AGT AGT ATA ATA ATA ATA ATA ATA ATC ATC ATC ATC ATC ATC ATC ATC ATC ATC ATG ATG ATG ATG ATG ATG ATG ATG ATT ATT ATT ATT ATT ATT CAA CAA CAA CAA CAA CAC CAC CAG CAG CAG CAG CAG CAG CAT CCA CCA CCA CCA CCC CCC CCC CCG CCG CCG CCG CCT CCT CCT CCT CCT CGA CGC CGG CGG CGG CTA CTA CTA CTC CTC CTC CTC CTG CTG CTG CTG CTG CTG CTG CTG CTT CTT CTT CTT GAA GAA GAA GAA GAA GAA GAA GAC GAC GAC GAG GAG GAG GAG GAG GAG GAG GAG GAT GAT GAT GAT GCA GCA GCA GCA GCA GCA GCA GCA GCA GCA GCC GCC GCC GCC GCC GCC GCC GCG GCG GCG GCG GCG GCG GCG GCG GCT GCT GCT GCT GCT GGA GGA GGA GGA GGA GGA GGA GGA GGA GGC GGC GGC GGC GGG GGG GGG GGG GGG GGG GGG GGG GGG GGG GGG GGT GGT GGT GGT GTA GTA GTC GTC GTC GTC GTC GTC GTC GTG GTG GTG GTG GTG GTG GTG GTG GTT TAC TAC TAC TAC TAC TAT TAT TAT TAT TCA TCA TCC TCC TCC TCC TCG TCG TCT TCT TCT TCT TCT TGC TGC TGC TGG TGT TGT TGT TGT TTA TTA TTA TTA TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TTG TTG TTG TTT TTT TTT TTT TTT
Eptesicus_fuscus                 --- AAA AAA AAA AAA AAA AAA AAA AAC AAC AAC AAT ACC AAA AAG AAG AAG AAG AAG AAG AAG AAG CAT AAC AAT AAT AAT AAT AAT ACA ACA ACA ACA ACA ACA TCA ACA ACC ACC ACC ACC ACC ACC ACG ACG ACG ACG ACG ACT ACT ACT ACT ACT ACT AGA AGA AGA AGA AGA AGA AGA AGC AGG AGG AGT AGT AGT ACA ATA ATA ATA ATG CTA ATC ATC ATC ATC ATC ATC ATC CTC CTC GTC ATG ATG ATG ATG ATG ATG ATG ATG ACT ATT ATT ATT ATT GTT CAA CAA CAA CAA CGA CAC CAC CAA CAG CAG CAG CAG CAG CAT CCA CCA CCA CCG CCC CCC CCC CCC CCG CCG CCT CCT CCT CCT CCT CCT CGA CGC CAG CGG CGG CTA CTA CTA ATG CTC CTC TTG CTC CTG CTG CTG CTG CTG CTG TTG CTT CTT CTT CTT GAA GAA GAA GAA GAA GAA GAC GAC GAC GAC GAG GAG GAG GAG GAG GAG GAG GAG GAA GAT GAT GAT GCA GCA GCA GCA GCA GCA GCA GCA GCC GCC GCC GCC GCC GCC GCC GCC GCC GCA GCG GCG GCG GCG GCG GCG GCT GCT GCT GCT GCT GCT AGC GGA GGA GGA GGA GGA GGA GGA GGC GGC GGC GGC GGC GGG GGG GGG GGG GGG GGG GGG GGG GGG GGG GGT GGA GGC GGT GGT GTA GTA GTC GTC GTC GTC GTC GTC GTC GTA GTG GTG GTG GTG GTG GTG GTG GTT TAC TAC TAC TAC TAT TAC TAC TAT TAT TCA TCA TCC TCC TCC TCC TCG TCG TCC TCT TCT TCT TCT TGC TGC TGC TGG TGC TGC TGC TGT GTG TTA TTA TTA ATC TTC TTC TTC TTC TTC TTC TTC TTT TTT CTG TTG TTG TTC TTT TTT TTT TTT
Ictidomys_tridecemlineatus       CCC AAA AAA AAA AAA AAA AAG AGA AAC AGC GTC AAC TCT AAA AAA AAG AAG AAG AAG ACC ACG CAG CAC AAC AAC AAT AAT AAT AGA ACA ACA ACA ACA ACC ACG TCC ACA ACC ACC ACC ACC ATC GCT ACA ACA ACA ACC ACT ACC ACC ACC ACT ACT ACT AGA AGA AGA AGG AGG GAT GGA AGC AAA AGG AGC AGC AGC CCG ATA ATC ATT GTG GTC ACC ATC ATC ATC ATC ATC ATC CTA CTG ATC ATG ATG ATG ATG ATG ATG CTG GCT ACA ATC ATT ATT ATT CAC CAA CAA CAG CTA CGA CAC CCC CAG CAA CAA CAG CAG CAG CAC CCA CCC CCT CTC CCC CCC CCG CCT CCG CCG ATT ACA CCC CCT CCT CCT CGA CGC CAG CAG CGG CTA CTG TTG CTA CTG CTT CTG CTC CTG CTG CTG CTG CTG CTG GTG CTC CTC CTT CTT AAA GAA GAA GAA GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAT GTG TCA GAT GAT GAT GAT ACA ACC GCA GCA GCA GCC GTG TTG CCC GTC GCC GCC GCC GCC GCC GCC GGT GTG GCA GCG GTG GTG TCA TCC GCG GCA GCC GCG GCT GCT TGC GGA GGA GGA GGA GGG GGG GGG AGC AGC AGC GGA GGG AGG GGA GGA GGA GGC GGC GGG GGG GGG GGG AGC AGT GGA GGC GGT GCA GTA ATC CTC GTC GTC GTC GTC GTG GTA CTG GTG GTG GTG GTG GTG TTG TTC TAC TAC TAT TTC TAC CAC TAT TAT TAT TCA TCG GCA TCC TCC TCT TCC TCG TCC AGG TCC TCT TTC AGC TGC TTC TGG TGC TGC TGT TGC CTC TCA TTG TTT GTC GTC TTC TTC TTC TTC TTC TTC CTC TTT ATG CTG TTG TTC CTG TTT TTT TTT
Marmota_flaviventris             CCC AAA AAA AAA AAA AAA AAG AGA AAC AGT GTC AAC TCT AAA AAA AAG AAG AAG AAG ACC AAG CAG CAC AAT AAC AAT AAT AAT AGA ACA ACA ACA ACG ACC ACA TCC ACA ACC ACC ACC ACC ATC GCT ACA ACA ACA ACC ACC ACC ACC ACT ACT ACT ACT AGA AGA AGA AGG AGG AAT GGA AGC AAA AGG AGC AGC AGT CCG ATA ATA ATT GTG GTC ACC ATC ATC ATC ATC ATC ATC CTA TTG ATC ATG ATG ATG ATG ATG ATG CTG GCT ACA ATC ATT ATT ATT TAC CAA CAA CAG CTA CGA CAC CCC CAG CAA CAA CAG CAG CAG CAC CCA CCC CCG CTC CCC CCC CCG CCA CCG CCG ATT ACA CCT CCT CCT CCT CGA CGC CAG CAG CGG GTA CTG TTG CTA CTG CTT CTG CTC CTG CTG CTG CTG CTG TTG GTG CTC CTT CTT CTT AAA GAA GAA GAA GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAT GTG TCA GAT GAT GAT GAT ACA ACC GCA GCA GCA GCA GTG TTG CCC GTC GCC GCC GCC GCC GCC GCC GGT GTG GCA GCG GTG GTG TCA TCC GCG GCG GCC GCG GCT GCT TGC GGA GGA GGA GGA GGG GGG GGG AGC AGC AGC GGA GGG AGG GGA GGA GGA GGC GGC GGG GGG GGG GGG AGT AGT GGT GGC GGG GCA GTG ATC GTC GTC GTC GTC GTC GTC GTA CTG GTG GTG GTG GTG GTG TTG TTC TAC TAC TAT TTC TAC CAC TAT TAT TAT TCA TCG GCA TCC TCC TCT TCC TCG TCC AGG TCC TCT TTC AGC TGC TTC TGG TGC TGC TGT TGC CTC TCA TTG TTT GTC GTC TTC TTC TTC TTC TTC TTC CTC TTT ATG CTG TTG TTC CTG TTT TTT TTT
Marmota_marmota                  CCC AAA AAA AAA AAA AAA AAG AGA AAC AGT GTC AAC TCT AAA AAA AAG AAG AAG AAG ACC AAG CAG CAC AAC AAC AAT AAT AAT AGA ACA ACA ACA ACG ACC ACA TCC ACA ACC ACC ACC ACC ATC GCT ACA ACA ACA ACC ACC ACC ACC ACT ACT ACT ACT AGA AGA AGA AGG AGG AAT GGA AGC AAA AGG AGC AGC AGT CCG ATA ATA ATT GTG GTC ACC ATC ATC ATC ATC ATC ATC CTA TTG ATC ATG ATG ATG ATG ATG ATG CTG GCT ACA ATC ATT ATT ATT CAC CAA CAA CAG CTA CGA CAC CCC CAG CAA CAA CAG CAG CAG CAC CCA CCC CCG CTC CCC CCC CCG CCA CCG CCG ATT ACA CCT CCT CCT CCT CGA CGC CAG CAG CGG GTA CTG TTG CTA CTG CTT CTG CTC CTG CTG CTG CTG CTG TTG GTG CTC CTT CTT CTT AAA GAA GAA GAA GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAT GTG TCA GAT GAT GAT GAT ACA ACC GCA GCA GCA GCA GTG TTG CCC GTC GCC GCC GCC GCC GCC GCC GGT GTG GCA GCG GTG GTG TCA TCC GCG GCG GCC GCG GCT GCT TGC GGA GGA GGA GGA GGG GGG GGG AGC AGC AGC GGA GGG AGG GGA GGA GGA GGC GGC GGG GGG GGG GGG AGT AGT GGT GGC GGG GCA GTG ATC GTC GTC GTC GTC GTC GTC GTA CTG GTG GTG GTG GTG GTG TTG TTC TAC TAC TAT TTC TAC CAC TAT TAT TAT TCA TCG GCA TCC TCC TCT TCC TCG TCC AGG TCC TCT TTC AGC TGC TTC TGG TGC TGC TGT TGC CTC TCA TTG TTT GTC GTC TTC TTC TTC TTC TTC TTC CTC TTT ATG CTG TTG TTC CTG TTT TTT TTT
Marmota_monax                    CCC AAA AAA AAA AAA AAA AAG AGA AAC AGT GTC AAC TCT AAA AAA AAG AAG AAG AAG ACC AAG CAG CAC AAC AAC AAT AAT AAT AGA ACA ACA ACA ACG ACC ACA TCC ACA ACC ACC ACC ACC ATC GCT ACA ACA ACA ACC ACC ACC ACC ACT ACT ACT ACT AGA AGA AGA AGG AGG AAT GGA AGC AAA AGG AGC AGC AGT CCG ATA ATA ATT GTG GTC ACC ATC ATC ATC ATC ATC ATC CTA TTG ATC ATG ATG ATG ATG ATG ATG CTG GCT ACA ATC ATT ATT ATT CAC CAA CAA CAG CTA CGA CAC CCC CAG CAA CAA CAG CAG CAG CAC CCA CCC CCG CTC CCC CCC CCG CCA CCG CCT ATT ACA CCT CCT CCT CCT CGA CGC CAG CAG CGG GTA CTG TTG CTA CTG CTT CTG CTC CTG CTG CTG CTG CTG TTG GTG CTC CTT CTT CTT AAA GAA GAA GAA GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAT GTG TCA GAT GAT GAT GAT ACA ACC GCA GCA GCA GCA GTG TTG CCC GTC GCC GCC GCC GCC GCC GCC GGT GTG GCA GCG GTG GTG TCA TCC GCG GCG GCC GCG GCT GCT TGC GGA GGA GGA GGA GGG GGG GGG AGC AGC AGC GGA GGG AGG GGA GGA GGA GGC GGC GGG GGG GGG GGG AGT AGT GGT GGC GGG GCA GTG ATC GTC GTC GTC GTC GTC GTC GTA CTG GTG GTG GTG GTG GTG TTG TTC TAC TAC TAT TTC TAC CAT TAT TAT TAT TCA TCG GCA TCC TCC TCT TCT TCG TCC AGG TCC TCT TTC AGC TGC TTC TGG TGC TGC TGT TGC CTT TCA TTG TTT GTC GTC TTC TTC TTC TTC TTC TTC CTC TTT ATG CTG TTG TTC CTG TTT TTT TTT
Myotis_lucifugus                 --- AAA AAA AAA AAA AAG AAA AAA AAC AAC AAC AAT ACC AAA AAG AAG AAG AAG AAG AAG AAG AAG CAT AAT AAT AAT AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA ACA ACC ACC ACC ACC ACC ACC ACG ACG ACT ACG ACG ACT ACT ACT ACG ACT ACT AGA AGA AGA AGA AGA AGA AGG AGC AAG CGG AGT AGT AGT ACA ATA ATC GTA GTG CTA CTC ATC ATC ATC ATC ATC ATC CTC CTG GTC ATG ATG ATG ATG ATG ATG CTG ATG ACT ATT ATT ATT ATT ATT CAA CAA CAA CAA CAA CAC CAC CAG CAG CAG CAG CAG CAG CAT CCA CCA CCA CCG CCC CCC CCC CCG CCA CCG CCT CCC CCT CCT CCT CCT CGA CGC CGG AAG CGG CTA ATA CTA CTT CTC CTC TTG CTC CTG CTG CTG CTG GTG CTG TTG CTT CTT CTT CTT GAA GAA GAA GAA GAA GAA GAC GAC GAC GAC GAG GAG GAG GAG GAG GAC GAG GAG GAC GAT GAT GAT GCG GCA GCA GCA GCA GCA GCG GCA GCG GCC GCC GCC GCC GCC GCC GCC GCC GCG GCG GCG GCG GCG GCG GCC GCT GCT GCT GCT GCT GCT AGT GGA GGA GGA GGA GGA GGA GGA GGC GGC GGC GGC GGC GGA GGG GGG GGG GGG GGG GGA GGC GGG GGG GGT GGC GGT GGT GGT GTA GTA GTC GTC GTC GTC GTC GTC GTC GTA ATG GTG GTG GTG GTG GTG GTG GTT TAC TAC TAC TAC TAC TAT TAC TAT TAT TCA TCA TCT TCC TCC TCT TCG TCA TCC TCG TCT TCT TCT TGC TGC TGC TGG TGT TGT TGC TGT CTG TTA TTA TTA TTC TTC TTC TTC TTC TTC TTC TTG TTC TTT CTG TTG TTG TAC TTT TTT TTT TTT
Rhinolophus_ferrumequinum        --- AAA AAA AAA AAA AAG AAA AAA AAC AGC ACC AAC ACC AAA AAA AAG AAG AAG AAG CCA AAG AAG CCG AAC AAT AAT AAT AAT AAC ACA ACA ACC ACG ACA ACA TCG ACA ACC ACC ACC ACC ATC GCC ACA ACG ACT ACA ACT ACT ACT ACT ACT ACT ACT AGA AGA AGA AGA AGA AAA GGA AGC AAG AGG AGC AGT AGC ACA ATA ATA GTT GTG GTG ACC ATA ATC ATC ATC ATT ATT CTA TTC ATC ATG ATG ATG ATG ATG ATG CTG GTG AGT ATC ATC ATT ATT ACC CAA CAG CAA CTA CGA CAT CCC CAG CAA CAG CAG CAG CAG CAT CCA CCA CCA CCC CCC CCC CCG CCG CCA CCG CCT ACC CCT CCC CCT CCT AGA CGC CAG CAG AGG GTG CTA CTA CTA CTC CTT TTG CTC CTC CTG CTG CTG CTG CTG GTG CTT GTT CTT CTT CAA GAA GAA GAA GAA GAA GAC GAC GAC GAG GAA GAG GAG GAG GAG GAC ACG ACA GAT GAC GAT GAT ACA ACA GCA GCA GGA GTG GTG GCA CCG GTC GCC GCC GCC GCC GCC GCC GCC GTG GCA GCG GTG GTG GCG TCG GCC GCT GCT GCT GCT GCT TGT GGA GGA GGA TGT GGA GGA GGG GGC AAC GGC GGC GGG AGG GGA GGA GGC GCG GGG GGG GGG GGA GGG ACC GGT GGC GGT GGT GCA GTG GTC GTC GTC GTC GTC GTT GTC GTA GTG GCC GTA GTG GTG GTG GTG GTT TAC TAC TAC TAC TAC TAT TAC TAT TAT TCA TCG GCA TCC TCC TCT TCG TCT TCC ACA TCC TCT TCT TGC TGC TGC TGG TGC TGT TGC TGT CTA TCA TTA TTA ATC ATC TTC TTC TTC TTC TTC TTG TTC TTT GTG CTG CTG TTT GTC TTC TTT TTT
Urocitellus_parryii              CCC AAA AAA AAA AAA AAA AAG AGA AAC AGC GTC AAC TCT AAA AAA AAG AAG AAG AAG ACC ACG CAG CAC AAC AAC AAC AAT AAT AGA ACA ACA ACA ACA ACC ACA TCC GCA ACC ACC ACC ACC ATC GCT ACA ACA ACA ACC ACC ACC ACC ACC ACT ACT ACT AGA AGA AGA AGG AGG AAT GGA AGC AAA AGG AGC AGC AGT CCG ATA ATA ATT GTG GTC ACC ATC ATC ATC ATC ATC ATC CTA TTG ATC ATG ATG ATG ATG ATG ATG CTG GCT ACA ATC ATT ATT ATT CAC CAA CAA CAG CTA CGA CAC CCC CAG CAA CAA CAG CAG CAG CAC CCA CCC CCT CTC CCC CCC CCG CCA CCG CCG ATT ACA CCT CCT CCT CCT CGA CGC CAG CAG CGG CTA CTG TTG CTA CTG CTT CTG CTC CTG CTG CTG CTG CTA TTG GTG CTC CTC CTT CTT AAA GAA GAA GAA GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAT GTG TCA GAT GAT GAT GAT ACA ACC GCA GCA GCA GCA GTG TTG CCC GTC GCC GCC GCC GCC GCC GCC GGT GTG GCA GCG GTG GTG TCA TCC GCG GCA GCC GCG GCT GCT TGC GGA GGA GGA GGA GGG GGG GGG AGC AGC AGC GGA GGG AGG GGA GGA GGA GCC GGC GGG GGG GGG GGG AGC AGT GGT GGC GGT GTA GTA ATC CTC GTC GTC GTC GTC GTG GTA CTG GTG GTG GTG GTG GTG TTG TTC TAC TAC TAT TAC TAC CAT TAT TAT TAT TCA TCG GCA TCC TCC TCT TCC TCG TCC AGG TCC TCT TTC AGC TGC TTC TGG TGC TGC TGT TGC CTC TCA TTG TTT GTC GTC TTC TTC TTC TTC TTC TTC CTC TTT ATG CTG TTG TTC CTG TTT TTT TTT
Ursus_americanus                 GCT AAA AAA AAG AAG AAA AAA AAA AAC AGT ACC AAC ACC AAA AAA AAG AAG AAG AAG ACG AGG AAG CGC CAC AAT AAT AAT AAT AAC ACA ACG ACA ACA ACG ACA TCA ACA ACC ACC ACG AGC ATC GCC ACA ACG ACC ACC ACA ACT ACT ACC ACT ACT ACT AGA AGG CGA AGA CGA AAA GGA AGT AAG AGG AGC AGT AGT CCC ATA ATA GTT GTG TTA ACC CTC ATC ATC ATC ATC ATT CTG CTC ATC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATT ATT ATC ATC ACT CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CCG CAT CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATT ACC CCT CCC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTA CTA CTC CTT TTG CTC CTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAA GAA GAA GAA GAA GAA GAC GAC GAC GCG GAA GAA GAC GAG GAG GAC GTG ACA GAC GAC GAT GAT ACC ACA GCA GCC GGA GCA GTG ACA CCG GTG GCC GCC GCC GCC GCC GCC GCC GTG GCG GCG GTG GTG GCG TCC GCT GCT GCT GCT GCC GCT TGT GGA GGA GGC GGA GGA GGA GGA GGC AGC GGC GGT GGG GGG GGA GGA GGT ACG GGC GGG GGG GGA GGG AAA GGC GGT GGT GGC GCA GTG GTC GTC GTC GTC GTC GTC GTC GTC GTG GTG GTG GTA GTG GTG GCG CTC TAC TAC TAC TTC TAT CAC TAT TAT TAT TCA TTG GCG TCC TCC TCT TCA TCG TCC ACA TCC TCT TTT TGC TGC TGC TGG TGC TGT TGC TGT CTG GCA TTA TTT AGT TTC CTC TTC TTC TTC TTC CTG CTC TTC ATG CTG CTG TTT TTC TTT TTT TTT
Ursus_arctos                     GCT AAA AAA AAG AAG AAA AAA AAA AAC AGT ACC AAC ACC AAA AAA AAG AAG AAG AAG ACG AGG AAG CGC CAC AAT AAT AAT AAT AAC ACA ACG ACA ACA ACG ACA TCA ACA ACC ACC ACG AGC ATC GCC ACA ACG ACC ACC ACA ACT ACT ACC ACT ACT ACT AGA AGG CGA AGA CGA AAA GGA AGT AAG AGG AGC AGT AGT CCC ATA ATA GTT GTG TTA ACC CTC ATC ATC ATC ATC ATT CTG CTC ATC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATT ATT ATC ATC ACT CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CCG CAT CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATT ACC CCT CCC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTA CTA CTC CTT TTG CTC CTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAA GAA GAA GAA GAA GAA GAC GAC GAC GCG GAA GAA GAC GAG GAG GAC GTG ACA GAC GAC GAT GAT ACC ACA GCA GCC GGA GCA GTG ACA CCG GTG GCC GCC GCC GCC GCC GCC GCC GTG GCG GCG GTG GTG GCG TCC GCT GCT GCT GCT GCC GCT TGT GGA GGA GGC GGA GGA GGA GGA GGC AGC GGC GGT GGG GGG GGA GGA GGT ACG GGC GGG GGG GGA GGG AAA GGC GGT GGT GGC GCA GTG GTC GTC GTC GTC GTC GTC GTC GTC GTG GTG GTG GTA GTG GTG GCG CTC TAC TAC TAC TTC TAT CAC TAT TAT TAT TCA TTG GCG TCC TCC TCT TCA TCG TCC ACA TCC TCT TTT TGC TGC TGC TGG TGC TGT TGC TGT CTG GCA TTA TTT AGT TTC TTC TTC TTC TTC TTC CTG CTC TTC ATG CTG CTG TTT TTC TTT TTT TTT
Callorhinus_ursinus              GCT AAA AAA AAA AAA AAA AAA AAA AAC AGT ACC AAG ACC AAA AAA AAG AAG AAG AAG ACG AGG AAG CCC AAT AAT AAT AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA ACA ACC ACC ACG AGC ATC GCC ACA ACA ACG ACG ACT ACT ACT ACT ACT ACT ACT AGA AGA CGA AGA AGA AAA GGT AGC AAG AGG AGC AGT AGT CCA ATA ATA GTT GTG TCA ACC CTC ATC ATC ATC ATC ATC CTG CTC GTC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATC ATT ATC ATC ACT CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CAG CAT CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATT ACT CCT CCC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTA CTA CTC TTT TTG CTC CTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAG CAA GAA GAA GAA GAA AAC GAC GAC GAG GAA GAA GAC GAG GAG GAC GTG ACA GAC GAC GAT GAT ACA ACA GCA GCC GGA GCA GTG ACA CCG GTC GCC GCC GCC GCC GCC GCT GCC GTG GCA GCG GTG GTG GCG TCG GCT GCT GCT GCT GCT GCT TGT GGA GGA GGC GGA GGA GGA GGG GGC AGC GGG GGT GGG GGG GGA GGA GGT CCG GGC GGG GGG GGG GGG AGA GGC GGT GGT GGT GCG GTG GTC GTC GTC GTC GTC GTC GTC GTT GTG GTG GTG GTA GTG GTG GTG CTT TAC TAC TAC TTC TAT CAT TAC TAT TAT TCA TTG GCA TCC TCC TCT TCA TCA TCT ACA TCC TCT TTT TGC TGC TGC TGG TGC TGT TGT TGT CTG GCA TTA TTT ATC TTC TTC TTC TTC TTC TTC CTG CTC TTC ATG CTG CTG TTT TTT TTT TTT TTT
Heterocephalus_glaber            CCT AAA AAA AAA AAG AAA AAA AGA AAT AGC ATC AAC ACG AAG AAA AAA AAG AAG AAG ATA CAG AAG CAC AAT AAT AAT AAT AAT AGC ACG ACA ACT ACA ACA ACG TCA ACC ACC ACT ACC ACC ATC GCC ACG ACC ACA ACG ACC ACT ACT ACT ACT ACT ACT AGA CGA AGA AGG AGA AAA GGA AGC AGG AGG AGC AGT AGT CCA ATA ATA ATT GTG GTC ACC ATA ATC ATC ATC ATC ATC CTA CTG ATC ACG ATG ATG ATG ATG ATG CTG GTG ATA ATT ATT ATC ATT AAA CAA CAA CAG CTG CGT CAC CCC CAG CAA CAG CAG CAG CAG CAA CCA CCC CCA CTC CCC CCC CCC CAG TGG CCG ATT CCC CCC CCC CCA CCT CGA CGC CAG CAA CGC GTG CTG CTA CTA CTA CTC CTG CTC CTT CTG CTG CTG CTG CTG GTG CTC CTT CTT CTT AAG GAT GAA GAA GAA GAA GAC GAC GAC GGT GAG GAG GAG GAG GAG GAC GTG TCG GAC GAT GAT GAT ACA ACA GCA GCA GCA GCA ACA TTG CCG GTC GCC GCC GCC GCC GCG GCC GGT GTG GCA GCC GTG GTG GCG TCG GCG GCT GCT GCT GCT GCT TAC GGA GGA GGA GGA CGA GGA GGG AGC AGT AGC GGC GAG AGG GGA GGG GGC GGG GGC GGG GGG GGG GGG AGC AGT GGT GGC GGC GCA GTG GTC GTT ATT GTC GTC GCC GTC GTA CTG GTG GTA GTG GTG GTG TTG CTT TAC TAC TAC TTC TAC CAT TAT TAT TAT TCC ACA GCT TCC TCG TCT TCT TCT TCC AAA TCC TCT TTC TGC TGC AGC TGG TGC TGT TGT TGC TTA GCA TTG TTT ATC TTC TTC TAC TTC TTC TTT TTG CTC TTT ATG CTA TTG TTT TTA TTT TTT TTT
Homo_sapiens                     CCT AAA AAA AAA AAA AAG AAA AAA AAC AGC ACG AAC ACG AAA AAA AAA AAG AAG CAG AAA AGG AAC CAC AAT AAT AGT AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA AAA ACC ACC ACC ACC ATC GCC ACA ACG ACC ACG ACA GCT ACT ACG ACT ACT ACT AGA AGA AGA CGG AGA AAA GGA AGC AAG AGG AGC AGT AGT CCA ATA ATC ATT GTG GTC ACC ATA ATC ATC ATT CTC ATC CTC CTT ATC TCA ATG ATG ATG CTG GTG ATG GTG ACA GTC ATT ATT ATA ACT CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CAG CAT CCA CGG CCG ATC CCC CCC CCG CCG CCA CCG ATT ACT CCT CCC CCT CCT CGA CGC CAG CAA CGG GTA CTA CTA TTA CTC CTC TTG CTC CTT CTG CTG CTG GTG CTG ATA CTT GCT CTT TTT AAC GAA GAA GAA GAA GAA GAC GAC GAT GAG GAA GAA GAC GAG GAG GAC GGG GCA GAC GAT GAC GAT ACA GCA GCA GCA GGA GTA ATG ATG CTG GTC GCC GCC GCC GCG GCC GCT GTT GTG GCA GCG GTA GTG GCG TCG GCG GCT GCT GCG GCT GCT TGT GGA GGA GGA GGA GGA GGA GGG GGC AGC GGC GGG GGG AGG GGG GGA GGT GGG GGC GGG GGG GGG GGG AGT GGT GGT GGT GGA GCA GTA GTC GTC GTC GTC GTC GTC GTC GTA GTG GTG GTA GTA GTG GTG TTG CTT TAC TAT TAC TTC TAC CAC TAT TAC TAT TCA ACG GCA TCC TCC TCT TCG TCC TCC ACG TCC TCT TCC TGC TGC TGC TGG TGC TGC TGT TGT CTA TTA TTA TTG ATC TTC TTC CTC TTC TTC TTC TTG TTC TTT ATG CTG CTG TTT TTG TTC TTT TTT
Lemmus_lemmus                    CCC AAA AAA AAA AAG AAA AAA AAC AAT AGC ACC AAC ACT AAA AAA AAA AAG AAG AAG CCG AGG AAG CAC AAT AAC AAT AAT AAT AGC ACA ACA ACC ACA ACC ACA TCA GCC ACC ACA ACC TCT ATT GCC ACC ATG ACA ACA ACA ACC ACC ACA ACG ACC ACT AGA AGA AGA AGG AGA AAA GGA AGC AGG AGG AGC AGT ACT CTA ATA ATC ATC GTG GTG ACT ATA ATC ATC ATC ATC ATT TTA ATT ATC ATG ATG ATG ATG ATG ATG CTG GCG ACT GTA ATC ATC ATT ACC GAG CAA CAA CTT AAG CAT CCC CAG CAA CAA CAG CAG CAG CAC CCA TTG CCG ATC CCA CCT CCC CAG CCG CCG ATT ACG CCT CCT CCC CCT CGA CGC CAA CAG CGG GTG CTC CTG CTC CTG CTC CTG CTC CTG CTG CTG TTG CTG CTG ATA CTC CTC CTC CTT CAA GAA GAA GAA GAA GAA GAC GAC GAC GGG GAA GAA GAA GAG GAG GAT GTG TCA GAC GAT GAT GAT ACC ACC GCA GCA GCG GCA GTG ATG CCG GTC ACC GCC GCC GCC ACT GCT ACC GTG GCA GCA GTG GTG TCC TCC GCT GCT GCT GCT GCC GCT TGC GGA GGA GGC GGT GGA GGA GGT AGC AAC AGC GGC GGA AGG GGG GGG GGC GGG GGT GGG GGG GGG GGG AGT ACA GGT GGT GGG GCC GTG GTC GTC GTC GTC GTC GTC GTG GTA CTG ATC GTA GTG GTG GTG CTG CTT TAC TAC TAC TAC TAC CAC TAT TAT TAT TCA ACG GCA TCC TCT TCC TCA TCT TCC TCA GCC TCA TTC TGC TGC GGC TGG TGC TGC TGT TGT TTA TCA TTG TTT GTT TTC TTC TTC TTC TTC TTC TTG CTC TTT CCG CTG TTG TTT TTA TTT TTC TTT
Microtus_ochrogaster             CCC AAA AAA AAA AAG AAA AAA AAC AAT AGC ACC AAC ACT AAA AAA AAA AAG AAG AAG CCG AGG AAG CAC AAT AAC AAT AAT AAT AGC ACA ACA ACC ACA ACC ACA TCC ACC ACC ACA ACC TCT ATT GCC ACC TTG ACA ACA ACA ACC ACC ACA ACA ACC ACT AGA AGA AGA AGG AGA AAA GGA AGT AGG AGG AGC AGT ACT CTA ATA ATC ATC GTG GTG ACC ATA ATC ATC ATC ATC ATC TTA ATT ATC ATG ATG ATG ATG ATG ATG CTG GCA ACG ATC ATC ATC ATT ACC CAA CAA CAA CTT AAG CAT CCC CAG CAA CAG CAG CAG CAG CAC CCA TTG CCG ATC CCC CCT CCC CAG CCA CCA ATT ACG CCT CCT CCC CCT CGA CGC CAA CAG CGG GTG CTC CTG CTG CTG CTC CTG CTC CTG CTG CTG CTG CTG CTG ATA CTC TTC CTC CTT CAA GAA GAA GAA GAA GAA GAC GAC GAC GGG GAA GAA GAA GAG GAG GAT GTG TCA GAC GAC GAT GAT ACA ACC GCA GCT GCG GCA GTG ATG CCA GTT ACC GCC GCC GCC ACT GCT ACC GTA GCA GCA GTG GTG TCC TCC GCT GCT GCT GCT GCC GCT TGC GGA GGA GGC GGT GGA GGA GGT AGC AAC AGC GGC GGC AGG GGG GGG GGC GGG GGT GGG GGG GGG GGG ACT ACC GGT GGT GGG GCC GTG GTC GTC GTA GTC GTC GTC GTC GTA CTG ATC GTA GTA GTG GTG CTG CTT TAC TAC TAC TAC TAC CAC TAT TAT TAT TCA ACG GCA TCC TCT TCT TCA TCT TCC TCA GCC TCA TTC TGC TGC GGC TGG TGC TGC TGT TGT TTA TCA TTG TTT GTG TTC TTC TTC TTC TTC TTT TTT CTC TTC CCG CTG TTG TTT TTA TTT TTC TTT
Mus_musculus                     GCC AAA AAA AAA AAA AAA AAA AAC AAC AGC GCT AAC TCA AAA AAA AAG AAG AAG AAG CCA AGG AAG CAA AAT AAC AAT AAT AAT AGC ACA ACC ACC ACA ACA ACA TCC TCC ACC ACA ACC TCT ATC GCC ACA ATG ACA ACT ACA ACC ACC ACG ACG ACC ACT AGA AGA AGA AGG AGA AGA GGG AGC AAG AGG AGC AGC TCT CTG ATA ATC ATC GTG GTC ACC ATA ATC ATC ATC ATC ATT CTG ATT ATC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATC ATC ATT GTT ACC CAA CAA CAG CTT AAA CAT CCA CAG CAA CAG CAG CAG CAG CAT CCA TTG CCA ATC CCC CCT CCC CAG CCG CCG ATT ACA CCT CCT CCC GCT CGA CGC CAA CAG CGC GTG CTC CTG CTG CTG CTC CTG CTC CTC CTA CTG CTG CTG CTG GTT ATG CTC CTT CTT AAA GAA GAA GAA GAA GAA GAT GAC GAC GGG GAG GAA GAA GAG GAG GAC GTG TCA GAC GAT GAT GAT ACA ACC GCA GCG GGG GCA GTG ATG CCG GTC ACC GCC GCC GCT ACT GCC ACC GTA GCC GCA GTG GTG TCA TCC GCG GCC GCC GCT GCC GCT TGT GGA GGA GGA GGT GGA GGA GGT AGC AAC AAC GGC GGG AGA GGG GGG GGC GGG GGC GGG GGG GGA GGG AGT ACA GGT GGT GGG GCC GTG GTC GTC GTC GTC GTC GTC GTC GTA CTG ATC GTG GTA GTA GTG CTG CTT TAC TAC TAC TAC TAC CAT TAT TAC TAT TCA ACG GCA TCC TCT TCT TCA TCT TCC TCA GCC TCA TTT TGC TGC GGC TGG TGC TGC TGT TGT TTA TCA CTC TTT GTT TTC TTC TTC TTC TTT TTC TTG TAC TTT CCG CTA CTG TTT TTA TTT TTC TTT
Mustela_erminea                  CCT AAA AAA AAA AAA AAA AAA AAA AAC AGT ACC AAC ACT AAA AAA AAG AAG AAG AAG AAA AGG AAG CCC AAT AAT AAT AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA ACA ACG ACC ACG AGC ATC GGC ACG ACG ACA ACC ACA ACT ACT ACC ACT ACT ACT AGA AGA CGA AGA AGA AAA GGA AGC AAG CGG AGC AGT AGT CCA ATA ATA ATT GTG TTA ACC CTC ATC ATT ATC ATC ATC CTG CTC ATC ACG ATG ATG ATG ATG ATG CTG GTG ACA ATC ATC ATC GTC ACC CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CGG CAT CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATC ACC CCT CTC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTG CTG CTC CTT TTG CTC TTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAA GAA GAA GAA GAA GAA GAC GAC GAC GAA GAG GAA GAC GAG GAG GAC GTG GCA GAC GAT GAT GAT ACA ACA GCA GCC GGA GCA GTG ACA CCC GTC GCC GCT GTC GCC GCC GCT GCC GTG GCA GCG GTG GTG GCT TTG GCT GCT GCT GCT GCC GCC TGT GGA GGA GGC GGG GGA GGC GGG GGC AGC GGC GGT GGA GGG GGA GGA GGT ACG GGC GGA GGG GGG GGG AGA GGC GGT GGT GGT GCG GTG GTC GTC GTC GTC GTC GTC GTC GTT GTG GCC GTA GTA GTG GTG GTG CTT TAC TAC TAC TTC TAT CAT TAT TAC TAT TCC CCG GCA TCC TCC TCT TCA TCG TCC ATG TGC TCT TTT TGC TGC TGC TGG TGC TGT TGT TGT CTG TCA TTA TTT ATC TTC TTC TTC TTC TTC TTC CTG TTC TTC GTG CTG CTG TTT TGT TTT TTC TTT
Mustela_putorius_furo            CCT AAA AAG AAA AAG AAA AAA AAA AAC AGT ACC AAC ACT AAA AAA AAG AAG AAG AAG ACA AGG AAG CCC AAT AAT AAT AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA ACA ACG ACC ACG AGC ATC GGC ACG ACG ACA ACC ACA ACT ACT ACC ACT ACT ACT AGA AGA CGA AGA AGA AAA GGA AGC AAG CGG AGC AGT AGT CCA ATA ATA ATT GTG TTA ACC CTC ATC ATT ATC ATC ATC CTG CTC ATC ACA ATG ATG ATG ATG ATG TTG GTG ACA ATC ATC ATC GTC ACC CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CGG CAT CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATC ACC CCT GTC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTG CTG CTC CTT TTG CTC TTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAA GAA GAA GAA GAA GAA GAC GAC GAC GAA GAA GAA GAC GAG GAG GAC GTG GCG GAC GAT GAT GAT ACA ACA GCA GCC GGA GCA GTG ACA CCC GTC GCC GCT GTC GCC GCC GCT GCC GTG GCA GCG GTG GTG GCT TTG GCT GCT GCT GCT GCC GCC TGT GGA GGA GGC GGG GGA GGC GGG GGC AGC GGC GGT GGA AGG GGA GGA GGT ACG GGC GGA GGG GGG GGG AGA GGC GGT GGT GGT GCG GTG GTC GTC GTC GTC GTC GTC GTC GTT GTG GCC GTA GTA GTG GTG GTG CTT TAC TAC TAC TTC TAT CAT TAT TAC TAT TCC CTG GCA TCC TCC TCT TCA TCG TCC ATG TGC TCT TTT TGC TGC TGC TGG TGC TGT TGC TGT CTG TCA TTA TTT ATC TTC TTC TTC TTC TTC TTC CTG TTC TTC GTG CTG CTG TTT TGT TTT TTC TTT
Myodes_glareolus                 CCC AAA AAA AAA AAG AAA AAA AAC AAT AGC ACC AAC ACT AAA AAA AAA AAG AAG AAG CCG AGG AAG CAC AAT AAC AAT AAT AAT AGC ACA ACG ACC ACA ACC ACA TCA ACC ACC ACA ACC TCT ATT GCC ACC ATG ACA ACA ACA ACC ACC ACA ACG ACC ACA AGA AGA AGA AGG AGA AAA GGA AGC AGG AGG AGC AGT ACT CTA ATA ATC ATC GTG GTG ACC ATA ATC ATC ATC ATC ATT TTA ATT ATC ATG ATG ATG ATG ATG ATG CTG GCG ACG ATC ATC ATC ATT ACC CAA CAA CAA CTT AAG CAT CCC CAG CAA CAG CAG CAG CAG CAC CCA TGG CCG ATC CCA CCT CCC CAG CCA CCG ATT ACG CCC CCT CCC CCT AGA CGC CAA CAG CGG GTG CTC CTG CTG CTG CTC CTG CTC CTG CTG CTG TTG CTG CTG ATA CTC TTC CTC CTT CAA GAA GAA GAA GAG GAA GAC GAC GAC GGA GAA GAA GAA GAG GAG GAT GTG TCA GAC GAC GAT GAC ACA ACC GCA GCA GCG GCA GTG ATG CAG GTC ACC GCC GCC GCC ACT GCT ACC GTA GCA GCA GTG GTG TCT TCC GCT GCT GCT GCT GCC GCG TGC GGA GGA GGC GGT GGA GGA GGT AGC AAC AGC GGC GGG AGG GGG GGG GGC GGG GGT GGG GGG GGG GGG AGT ACC GGT GGT GGG GCC GTG GTC GTC GTT GTC GTC GTC GTT GTA CTG ATC GTA GTA GTG GTG CTG CTT TAC TAC TAC TAC TAC CAC TAT TAT TAT TCA ACG GCA TCC TCT TCT TCA TCT TCC TCA GCC TCC TTC TGC TGT GGC TGG TGC TGC TGT TGT TTA TCA TTG TTT GTG TTC TTC TTC TTC TTC TTC TTG CTC TTC CAG CTG TTG TTT TTA TTT TTC TTT
Neovison_vison                   CCT AAA AAA AAA AAG AAA AAA AAA AAC AGT ACC AAC ACC AAA AAA AAG AAG AAG AAG ACA AGG AAG CCC AAT AAT AAC AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA ACA ACG ACC ACG AGC ATC GGC ACG ACG ACA ACC ACA ACT ACT ACC ACT ACT ACT AGA AGA CGA AGA AGA AAA GGA AGC AAG CGG AGC AGT AGT CCA ATA ATA ATT GTG TTA ACC CTC ATC ATT ATC ATC ATC CTG CTC ATC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATC ATC ATC GTC ACC CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CGG CAT CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATC ACC CCT CTC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTG CTG CTC CTT TTG CTC TTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAA GAA GAA GAA GAA GAA GAC GAC GAC GAA GAA GAA GAC GAG GAG GAC GTG ACA GAC GAT GAT GAT ACA ACA GCA GCC GGA GCA GTG ACA CCC GTC GCC GCT GTC GCC GCC GCT GCC GTG GCA GCG GTG GTG GCG TTG GCT GCT GCT GCT GCC GCC TGT GGA GGA GGC GGG GGA GGC GGG GGC AGC GGC GGT GGA GGG GGA GGA GGT ACG GGC GGA GGG GGG GGG AGA GGC GGT GGT GGT GCG GTG GTC GTC GTC GTC GTC GTC GTC GTT GTG GCC GTA GTA GTG GTG GTG CTT TAC TAC TAC TTC TAT CAT TAT TAC TAT TCC CTG GCA TCC TCC TCT TCA TCG TCC ATA TGC TCT TTT TGC TGC CGC TGG TGC TGT TGC TGT CTG TCA TTA TTT ATC TTC TTC TTC TTC TTC TTC CTG TTC TTC GTG CTG CTG TTT TTT TTT TTC TTT
Ochotona_princeps                TCT AAA AAA AAA AAG AAA AAA AGA AAT AGC ACC AAT ACA AAA AAG AAA AAG AAG AAG ACA AGG AAG CCC AAT AAC AAT AAT AAT AGC ACA ACA ACC ACA ACA ACA TCC TCA ACC ACC ACC GGA ATC GCC ACG ACG ACT ACA ACG ACA ACT ACG ACT ACT ACT AGG AGA AGA AGA CGA GAA GGT AGC AAG AGG AGC AGT AGC CCC ATA ATC ATT GTG GTT ACC ATA ATC ATT ATC ATC ATT CTG CTC ATC ATG ATG ATG ATG ATG ATG CTG GTG GAC ATC ATC ATC ATT ACT CAA CAG CAA CTA CGT CAC CCC CAG CAG CAG CAG CAG CAG CAC CAA CCG CCA CTC CCC CCC CCC CAG CCG CCG ATC ACG CCT CCT CCT CCT CGA CGC CAG AAG CGC GCA CTA CTC CTA CTC CTC CTG CTC CTC CTG CTG CTG CTG CTG GTG CTC CTT CTG CTT GAC GTT GAA GAG GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAC GTG GGG GAT GAT GAT GAT ACC ACA GCA GCA GCC GCA GTG TTA ACC GTG GCC GCC GCA GCC GCC GCT GGC GTG GCG GCG GTG GTG GCG ACG GCC GCT GCT GCT GCT GCG TGT GGA TTA GGA GGA GGA GGC GGG AGC AGC GGC GGC GAG AGG GGA GGA GGT GGG GGC GGG GGG GGG GGG AGC ACT GGT GGC GGT GCC GTG GTC GTC ATT GTC GTC GTT GTT GTA CTG GTG GTG GTG GTG GTG CTG CTT TAC TAC TAC TTC TAC CAT TAC TAC TAC TCA ACT GCC TCG TCC TCT TCG TCT ACC TCC TCC TCG TTC AGC TGC TGT TGG TGC TGC TGT TGT CTA TGT CAG TTT ATT TTC TTC TGG TTC TTT TTT TTG TTA TTT CTG CTG CTG TTT TTG TTT TTT TTT
Oryctolagus_cuniculus            CCG AAA AAG AAA AAA AAA AAA AGA AAC AGC ATC AAC ACG AAA AAA AAA AAG AGG AAG GCG AGG AAG CCC AAT AAC AAT AAC AAT AAC ACA ACA ACA ACA ACA ACG TCA ACA ACC ACC ACC ACC ATT GCC ACG ACA ACT ACC ACG ACC ACG ACG ACA ACT ACT AGG AGG AGA AGA AGG GAA GGG AGC AAG AGG AGC AGT AGT CCA ATA ATC ATT GTG GTT ACC ATA ATC ATT ATC ATC ATC CTG CTC ATC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATC ATC ATC ATT ACT CAA CAA CAG CAA GGA CAC CCC CAA CAA CAG CAG CAG CAG CAC CCG CCC CCA CTC CCC CCC CCA CCG CCA CCG ATC ACT CCC CCT CCT CCT CGA CGC CAG AAG CGG GTA CTA CTC CTA CTC CTC CTG CTC CTC CTG CTG CTG CTG TTG GTG CTG CTT CTG CTT GAA GAA GAA GAG GAA GAG GAC GAC GAC GGG GAA GAA GAC GAG GAG GAC GTG TCG GAT GAT GAC GAT ACC ACA GCA GCA GGA GCA GTG TTA ACC GTG GCC GCC GCC GCC ACC GCT GGC GTG GCG GCG GTG GTG GCA ACG GCC GCT GCC GCC GCT GCT TGT GGA GGA GGA GGC GGA GGA GGG AGC AGC GGC GGC GGG AGG GGA GGA GGC GGG GGC GGG GGG GGG GGG AGC AGT GGT GGC GGT GCT GTG GTC GTC GTC GTC GTC GTC GTC GTA GTG GTG GTG GTG GTG GTG CTG CTT TAC TAC TAT TTC TAC CAC TAC TAC TAC TCA ACG GCG TCA TCC TCT TCA TCT ACC ACC TCC TCG TTC TGC TGC TTC TGG TGC TGC TGT TGT CTA TCG TTA TTT ATC TTC TTC TTC TTC TTC TTT TTG TTC TTT CTG CTG CTC TTC TTC TTT TTT TTT
Phoca_vitulina                   GCT AAA AAA AAA AAA AAA AAA AAA AAC AGT ACC AAG ACC AAA AAA AAG AAG AAG AAG ACG AGG AAG CCC AAC AAT AAT AAT AAT AAC ACA ACA ACA ACA ACA ACA TCA ACA ACC ACC ACG AGC ATC GCC ACA ACG ACG ACG ACT ACT ACT ACT ACT ACT ACT AGA AGA CGA AGA AGA AAA GGT AGC AAG AGG AGC AGT GGT CCA ATA ATA GTT GTG TTA ACC CTC ATC ATC ATC ATC ATC CTG CTC GTC ATG ATG ATG ATG ATG ATG CTG GTG ACA ATC ATT ATC ATC ACT CAA CAA CAA CTC CGA CAC CCC CAG CAA CAG CAG CAG CAG CAC CCA CCA CCA CTC CCC CCC CCG CAG CCG CCG ATT ACC CCT CCC CCT CCT CGA CGC CTG CAG CGG GTA CTA CTA CTA CTC CTT TTG CTC CTC CTG CTG CTG CTG CTG GTG CTT GTC CTT CTT AAA GAA GAA GAA GAA GAA AAC GAC GAC GAG GAA GAA GAC GAG GAG GAC GCG ACA GAC GAC GAT GAT ACA ACA GCA GCC GGA GCA GTG ACA CCG GTC GCC GCC GCC GCC GCC GCT GCC GTG GCA GCG GTG GTG GCG TCG GCT GCT GCT GCT GCT GCT TGT GGA GGC GGC GGA GGA GGA GGG GGC AGC GGC GGT GGG GGG GGA GGA GGT CCG GGC GGG GGG GGG GGG AGA GGC GGT GGT GGT GCG GTG GTC GTC GTC GTC GTT GTC GTC GTT GTG GTG GTA GTA GTG GTG GTG CTT TAC TAC TAC TTC TAT CAT TAC TAC TAT TCA TTG GCA TCC TCC TCT TCA TCG TCC ACA TCC TCT TTT TGC TGC TGC TGG TGC TGT TGT TGT CTG GCA TTA TTT ATC TTC TTC TTC TTC TTC TTC CTG CTC TTC ATG CTG CTG TTT TTC TTT TTT TTT
Pteropus_vampyrus                --- AAA AAA AAA AAA AAA AAA AAA AAT GGC ACC AAC ACC AGA AAG AAG AAG AGG AAG ACA AGG AAG CAC AAT AAC AGT AAT AAT AAC ACA ACA ACC ACA ACA ACG TCG ACA ACC ACC ACC GCC ATC GCC ACG ACG ACG ACA ACA ACT ACC ACT ACT ACT ACT AGA AGA AGG AGA AGA AAA GGA AGC AAG CGG AGC AGC AGT CCA ATA ATA ATC GTG GTA ACC CTA ATC ATC ATC ATC ATC CTA CTC ATC ACG ATG ATG ATG ATG ATG CTG GTG ACC ATC GTC ATT ATT ACT CAA CAA CAG CTC AGA CAC CCC CAG CAA CAA CAG CAG CAG CAT CCA CCC CCA CTC CCC CCC CCG CAG CCG CCG ATC ACC CCT CTC CCT CCT CGA CGC CAG CAG CGG GTA CTA CTA CTA CTC CTT CTG CTC CTC CTG CTG CTG CTG CTG GTG CTT GTT CTT CTT AAA GAA GAA GAA GAA GAA GAC GAC GAC GAA GAG GAA GAC GAA GAG GAC ATG ACA GAC GAC GAT GAT ACG GCA GCA GCG GGA GCC GTG TTA CCC TGC GCC GCC GCC GCC ACC GCC GCC ATG GCA GCA GTG GTG GCA TCG GCT GCG GCT GCT GCC GCC TGT GGA GGA GGA GCA GGA GGA GGG GGC AGC GGC GGC GGG CGG GGA GGA GGC GCG GGG GGG GGG GGG GGG AGT GGT GGC GGT GGC GCA GTG GTC GTC ATC GTC GTC GTC GTC GTA ATG GCG GTA GTG GTG GTG GTG ATC TAC TAC TAC TTC TAC CAT TAC TAT TAT TCC TCG GCA TCC GCC TCT TCG TCT TCT ACA TCC TCC TCC TGC TGC TGC TGG TGC TGT TGC TGT CTA TCA TTA TTA ATC TTC TTC TTC TTC TTC TTC TTG CTC TTT ATG CTG CTG TTT GTC TTT TTC TTT
Rattus_norvegicus                GCC AAA AAA AAA AAG AAA AAA AAC AAC AGC GCT CAC ACG AAG AAA AAG AAG AAG AAG CCA AGG AAG CAA AAT AAC AAT AAC AAT AGC ACA ACC ACC ACA ACA ACA TCC ACC ACC ACG ACC TCT ATC GCC ACA ATG ACA ACC ACA ACC ACC ACT ACG ACT ACG AGA AGA AGA AGG AGA AGA GGG AGC AAG AGG AGC AGT TCT CTA ATA ATC ATC GTG GTC ACC ATA ATC ATC ATC ATC ATT CTG ATC ATC ATG ATG ATG ATG ATG ATG CTG GTG ACG ATC ATC ATT GTT ACC CAA CAA CAG CTT AAA CAT CCC CAG CAA CAG CAA CAG CAG CAT CCA TTG CCG ATC CCC CCC CCC CAG CCG CCG ATT ACA CCT CCT CCC CCT CGA CGC CAA CAG CGC GCG CTC CTG CTG CTG CTC CTG CTC CTC TTA CTG CTG CTG CTG GTT ATG CTC CTG CTT CAC GAA GAA GAA GAA GAA GAC GAC GAC GGG GAG GAA GAA GAG GAG GAT GTG TCA GAC GAT GAC GAT ACA ACC GCA GCA GGA GCC GTG ATG TCG GTC ACC GCT GCC GCC ACT GCC ACT GTA GCA GCA GTG GTG TCT TCC GCT GCC GCT GCT GCC GCT TGC GGT GGA GGC GGC GGA GGA GGT AGC AGC AGT GGC GGG CGG GGG GGG GGC GGG GGC GGG GGG GGA GGG AGT ACA GGT GGT GGG GCC GTG GTC GTC GTC GTC GTC GTC GTG GTG CTG ATC GTA GTA GTG GTG CTA CTT TAC TAC TAC TAC TAC CAC TAT TAC TAT TCA GCA GCG TCC TCT TCT TCA TCT TCC TCA GCC TCC TTT TGC TGC GGC TGG TGC TGC TGT TGT TTG TCG TTG TTT GTC TTC TTC TTC TTC TTT TTC TTG TAC TTT CCG CTA CTG TTT TTA TTT TTC TTT
Sorex_araneus                    GCA AAA AAG AAA AAG AAA AAA AAG ACC GGG AAC AAC ACG AAG AAA AAG AAG AAG AGG CCG AAG AAG CAC AAC AAC AAC AAT AAC AGC ACG ACC ACC ACA ACC GCA TCC AAC ACC ACT ACC GAC ATC GCC ACG ATG ACG ACC ACA ACG ACG ACG ACA AGT ACC AGG TAC AGG AGG AGG AAA GGA AGC AAG CGC AGC AGC ACC CCG ATC ATC ATC ATG GTG GCC CTG ATC ATC ATC ATC ATC CTG ATC ATC GCC ATG CTC CTC ATG ATG CTG GTG ACC GTG ATC ATC GTG AGG CAA CAG CAG CTG AAA CAC CAC CAC CAG CAG CAG CAG CAG AAA CCG CCC CCC TTC CCT CCC CCC CCC CCC CCG ATT ACC CCC CTC CCC CCC CGG CGT CAG CAG CGG GTG GTC CTG CTA CTC CTC CTG CTC CTG CTG CTG CTG GTG CTC GTG ATG GCG CTG CTG AAC GAG GAA GAA GAG GAG GAC GAC GAC GAG GAA GAA GAC GAA GAG GAC GTG GTC GAC GAT GAC GAT GTA ACG GCA GCC GGG GCC GTG ACA CAC ATG AGC GCC GCC GCC GCC GCC GGC GTG GCA GCT GTG GCC TCC GAC GCG GCT GCT GCC GCT GCG TGC GGC GGG GGG GGT GGC GGC GGG GGC AAC GCC GGC CAC AGG GGA GGG GGC CCC GGC GGG GGG GGA GGG CCT GGG GGG GGA TGG GTG GTG ATG GTC GTC GTC GTC GTG GTG GTG GTG ATC GTT GTG GTG GTG GTG CTG TAC TAC TAC TAC TAC CAC TAC TAC TAC TCC TCG GCG TCC TCC TCC TCG TCT GCC CTT TCT TCG TCT TGC TGC AGC TGG TGC TGC TGT TGC CTC ATG TTA TTT GTG TTC CTC TTC TTC TTC TTC CTC CTC TTC CTG CTG CTT TAC TTC TTC TTC TTT
Talpa_europaea                   CCC AAA AAG AAA AAG AAA AAG AAG ACC AGC ATC AAC TCC AAG AAG AAG AAG AAG AAG CCG AGG AAG GCC AAC AAT AAT AAC AAC AGC ACA ACC ACC ACA ACG ACC TCC GCC ACC ACC ACC AGC ATC GCC ACG ACG ACG ACC ACG ACC ACC ACC ACC AGT ACT AGG AGA AGA AGG AGG ACG GGC AGC AAG AGG AGC CAC ACT CCC ATA ATC ATC GTG GTC ACC GTG ATC ATC ATC ATC ATC CTG ATC ATC ATG ATG ATG CTG ATG ATG CTG GTG GGC ATT ATC ATC GTC CAC CAA CAG CAG CTC CGC CAC CAC CAG CAA CAG CAG CAG CAG CAC CCG CCC CCG CTC CCC CCC CCC CCG CTG CCG ATC ACG CCC CTC CCC CCG CGG CGC CAG CGG CGG GTG CTG CTG CTA CTC CTG CTG CTC CTG CTG CTG CTG CTG CTG CTG ATG GCG CTT CTT AAG GAC GAA GAA GAG GAA GAC GAC GAC GAG GAG GAG GAC GAG GAG GAC GTC TCG GAC GAT GAT GAC ATG ACG GCA GCG GGC ATC GTG ACA TCC GTG GCC GCC GCC GCC GCC GCA GGC GTG GCC GCG CAG GCG GCA CCG GCG GCT GCA GCT GCT GCT TGT GGC GGA GGG GGC GGG GGA GGG GGC AGC GCC GGC GGC AGG GGG GGA GGC CCC GGC GGG GGG GGG GGC AGT GGG GGC GGC GGC GCC GTG ATC GTC GTG GTC GTC GTC GTG GTG GTG GTG GTG GTG GTG GTG ACC CTC TAC TAC TAC TTC TAC CAC TAT TAC TAT TCT TCG GCC TCC TCC TCT TCG TCC TCC CTG GCT TCT TTC TGC TGC ACC TGG TGC TGC TGC TGC CTG TCC CTG TTC GTC GTC TTC TTC TTC TTC TTC TTC CTG TTT ATG CTG CTG TTC GTC TTC TTC TTT
Talpa_occidentalis               CCC AAA AAG AAA AAG AAA AAG AAG ACC AGC ATC AAC TCC AAG AAG AAG AAG AAG AAG CCG AGG AAG GCC AAC AAT AAT AAC AAC AGC ACA ACC ACC ACA ACG ACC TCC GCC ACC ACC ACC AGC ATC GCC ACG ACG ACG ACC ACG ACC ACC ACC ACC AGT ACT AGG AGA AGA AGG AGG ACG GGC AGC AAG AGG AGC CAC ACT CCC ATA ATC ATC GTG GTC ACC GTG ATC ATC ATC ATC ATC CTG ATC ATC ATG ATG ATG CTG ATG ATG CTG GTG GGC ATT ATC ATC GTC CAC CAA CAG CAG CTC CGC CAC CAC CAG CAA CAG CAG CAG CAG CAC CCG CCC CCG CTC CCC CCC CCC CCG CTG CCT ATC ACG CCC CTC CCC CCG CGG CGC CAG CGG CGG GTG CTG CTG CTA CTC CTG CTG CTC CTG CTG CTG CTG CTG CTG CTG ATG GCG CTT CTT AAG GAC GAA GAA GAG GAA GAC GAC GAC GAG GAG GAG GAC GAG GAG GAC GTC TCG GAC GAT GAT GAC ATG ACG GCA GCG GGC ATC GTG ACA TCC GTG GCC GCC GCC GCC GCC GCA GGC GTG GCC GCG CAG GCG GCG CCA GCG GCT GCA GCT GCT GCT TGT GGC GGA GGG GGC GGG GGA GGG GGC AGC GCC GGC GGC AGG GGG GGG GGC CCC GGC GGG GGG GGG GGC AGT GGG GGC GGC GGC GCC GTG ATC GTC GTG GTC GTC GTC GTG GTG GTG GTG GTG GTG GTG GTG ACC CTC TAC TAC TAC TTC TAC CAC TAT TAC TAT TCC TCG GCC TCC TCC TCT TCG TCC TCC CTG GCT TCT TTC TGC TGC ACC TGG TGC TGC TGC TGC CTG TCC CTG TTC GTC TTC TTC TTC TTC TTC TTC TTC CTG TTT ATG CTG CTG TTC GTC TTC TTC TTT



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CODONML (in paml version 4.10.10, 29 Jan 2026)  /data/dormanomics_validation/ucp1/work/leave_hedgehog/occupancy80.phy
Model: several dN/dS ratios for branches, 
Codon frequency model: F3x4
ns =  29  ls = 306

Codon usage in sequences
--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT   5   6   5   5   5   5 | Ser TCT   5   4   3   3   3   4 | Tyr TAT   4   3   4   4   4   4 | Cys TGT   4   1   1   1   1   1
    TTC  10   8  11  11  11  11 |     TCC   4   5   7   7   7   6 |     TAC   6   7   4   5   4   4 |     TGC   3   6   5   5   5   5
Leu TTA   4   3   0   0   0   0 |     TCA   2   3   4   4   4   4 | *** TAA   0   0   0   0   0   0 | *** TGA   0   0   0   0   0   0
    TTG   3   4   5   7   7   7 |     TCG   2   2   2   2   2   2 |     TAG   0   0   0   0   0   0 | Trp TGG   2   2   2   2   2   2
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT   4   4   3   4   4   5 | Pro CCT   5   6   5   4   4   5 | His CAT   1   2   0   0   0   1 | Arg CGT   0   0   0   0   0   0
    CTC   4   5   7   5   5   4 |     CCC   3   4   7   6   6   6 |     CAC   2   2   5   4   5   4 |     CGC   1   1   1   1   1   1
    CTA   3   4   4   3   3   3 |     CCA   4   3   1   2   2   2 | Gln CAA   5   5   4   4   4   4 |     CGA   1   2   2   2   2   2
    CTG   8   7  14  12  12  12 |     CCG   4   3   4   5   5   4 |     CAG   6   6   8   8   8   8 |     CGG   3   2   1   1   1   1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT   6   4   5   5   5   5 | Thr ACT   5   7   4   4   4   4 | Asn AAT   6   6   3   5   4   4 | Ser AGT   3   3   1   4   4   4
    ATC  10   8  11  10  10  10 |     ACC   7   7  12  12  12  12 |     AAC   5   4   4   3   4   4 |     AGC   1   2  10   7   7   7
    ATA   6   3   1   2   2   2 |     ACA   7   8  11  11  11  11 | Lys AAA   8   9  10  10  10  10 | Arg AGA   7   7   5   5   5   5
Met ATG   9  11   8   8   8   8 |     ACG   6   5   2   1   1   1 |     AAG  10   8   5   6   6   6 |     AGG   2   2   5   5   5   5
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT   1   2   0   0   0   0 | Ala GCT   5   6   4   4   4   4 | Asp GAT   4   3   6   5   5   5 | Gly GGT   4   3   2   2   2   2
    GTC   7   8   9  11  11  11 |     GCC   7   9   8   7   7   7 |     GAC   3   4   4   4   4   4 |     GGC   4   6   3   3   3   3
    GTA   2   3   2   2   2   2 |     GCA  10   9   7   7   7   7 | Glu GAA   7   7   6   6   6   6 |     GGA   9   8  10   9   9   9
    GTG   8   8  13  13  13  13 |     GCG   8   6   3   4   4   4 |     GAG   9   9   4   4   4   4 |     GGG  11  10   9  10  10  10
--------------------------------------------------------------------------------------------------------------------------------------

--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT   5   4   5   6   6   8 | Ser TCT   5   4   3   2   2   3 | Tyr TAT   3   3   4   4   4   3 | Cys TGT   3   4   1   3   3   4
    TTC   8   8  10   8   9   8 |     TCC   3   4   7   5   5   3 |     TAC   8   7   5   4   4   5 |     TGC   4   5   5   5   5   4
Leu TTA   3   2   0   2   2   1 |     TCA   4   2   4   3   3   5 | *** TAA   0   0   0   0   0   0 | *** TGA   0   0   0   0   0   0
    TTG   5   2   7   2   2   2 |     TCG   2   4   2   1   1   1 |     TAG   0   0   0   0   0   0 | Trp TGG   2   2   2   2   2   2
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT   5   4   3   4   4   4 | Pro CCT   5   4   5   3   3   3 | His CAT   2   2   1   1   1   2 | Arg CGT   0   0   0   0   0   0
    CTC   5   3   7  10   9   8 |     CCC   4   5   6   5   5   5 |     CAC   2   0   4   3   3   1 |     CGC   1   1   1   2   2   1
    CTA   3   6   5   3   3   3 |     CCA   4   5   2   3   3   4 | Gln CAA   5   4   4   4   4   5 |     CGA   1   1   2   4   4   3
    CTG   9   8  11  11  11  11 |     CCG   3   5   4   5   5   5 |     CAG   6   8   8   7   7   8 |     CGG   3   0   1   1   1   1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT   5   4   5   4   4   2 | Thr ACT   7   8   3   6   6   9 | Asn AAT   6   4   3   4   4   5 | Ser AGT   4   2   2   5   5   3
    ATC   7   9  10   8   8  10 |     ACC   7  11  13  10  10   5 |     AAC   4   5   5   3   3   3 |     AGC   1   4   9   3   3   4
    ATA   2   3   2   2   2   2 |     ACA   8  12  11  12  12  15 | Lys AAA   8  10  10  11  11  11 | Arg AGA   6   6   5   2   2   5
Met ATG   9   7   8   8   8   8 |     ACG   5   3   1   6   6   4 |     AAG  11   8   5   8   8   8 |     AGG   1   3   5   3   3   2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT   1   4   0   1   1   2 | Ala GCT   6   5   4   6   6   8 | Asp GAT   3   3   5   2   2   2 | Gly GGT   4   3   3   4   4   6
    GTC   8   8   9   9   9  10 |     GCC   9  10   8  10  10   8 |     GAC   6   5   4   7   7   6 |     GGC   7   5   2   6   6   4
    GTA   4   2   3   2   2   2 |     GCA   6   6   8   4   4   5 | Glu GAA   6   6   6   7   7   6 |     GGA   9  10   9  11  11   8
    GTG   8  17  13  15  15  15 |     GCG   9   3   3   6   6   3 |     GAG   8   6   4   3   3   4 |     GGG   7   6   9   5   5   8
--------------------------------------------------------------------------------------------------------------------------------------

--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT   7   5   5   6   7   5 | Ser TCT   4   2   3   4   5   2 | Tyr TAT   3   3   3   3   2   3 | Cys TGT   2   3   2   2   3   5
    TTC   6   8   8   9   6  11 |     TCC   4   6   5   5   5   4 |     TAC   7   5   6   6   8   5 |     TGC   4   5   5   5   4   5
Leu TTA   2   3   3   3   2   2 |     TCA   1   3   7   6   8   3 | *** TAA   0   0   0   0   0   0 | *** TGA   0   0   0   0   0   0
    TTG   5   5   5   4   2   2 |     TCG   3   2   0   0   0   1 |     TAG   0   0   0   0   0   0 | Trp TGG   3   2   2   2   2   2
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT   5   5   3   3   4   5 | Pro CCT   2   4   4   4   3   4 | His CAT   1   1   1   1   3   2 | Arg CGT   1   0   0   0   0   0
    CTC   5   7   8   6   6   7 |     CCC   8   4   4   5   3   5 |     CAC   2   3   3   3   0   1 |     CGC   2   1   1   1   2   1
    CTA   5   3   1   1   2   1 |     CCA   4   3   2   4   4   4 | Gln CAA   5   5   6   6   5   4 |     CGA   3   2   1   1   1   3
    CTG  11   8  12  14  14  13 |     CCG   2   4   6   3   4   4 |     CAG   9   7   6   7   8   7 |     CGG   0   3   1   1   0   3
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT   6   5   5   4   4   2 | Thr ACT   8   6   6   5   3   6 | Asn AAT   6   4   5   5   4   5 | Ser AGT   4   4   2   2   1   3
    ATC  10   8  11  13  12  11 |     ACC   7   6  14  16  12   7 |     AAC   1   5   4   4   6   3 |     AGC   8   4   6   5   6   4
    ATA   5   4   3   3   2   2 |     ACA   8  10  10  11  12  13 | Lys AAA  11  13  10  10  11  13 | Arg AGA   4   4   4   4   6   5
Met ATG   7   8   9   8  10   7 |     ACG   6   7   3   3   3   6 |     AAG   7   4   6   6   6   6 |     AGG   4   3   5   5   3   1
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT   1   1   1   1   3   1 | Ala GCT   6   7   6   7   5   7 | Asp GAT   4   3   4   3   4   3 | Gly GGT   3   4   5   5   4   5
    GTC   6  10   7   6   9  11 |     GCC   8   5   8   7  11   8 |     GAC   5   6   4   5   4   6 |     GGC   5   3   4   5   4   7
    GTA   2   7   3   5   4   3 |     GCA   7   7   6   6   4   5 | Glu GAA   4   7   8   8   7   7 |     GGA   7  10   6   5   6   9
    GTG  13  10  13  11  10  14 |     GCG   3   5   2   1   2   2 |     GAG   7   4   4   3   4   4 |     GGG   7  10   9   9  11   6
--------------------------------------------------------------------------------------------------------------------------------------

--------------------------------------------------------------------------------------------------------------------------------------
Phe TTT   5   4   6   8   6   6 | Ser TCT   2   5   2   3   2   2 | Tyr TAT   3   3   3   0   1   2 | Cys TGT   4   3   3   5   3   4
    TTC  11  10  11   5  11   9 |     TCC   4   4   4   4   2   4 |     TAC   5   6   5   8   7   6 |     TGC   6   4   5   3   4   4
Leu TTA   2   3   2   3   2   2 |     TCA   3   6   3   2   4   3 | *** TAA   0   0   0   0   0   0 | *** TGA   0   0   0   0   0   0
    TTG   3   4   2   2   2   2 |     TCG   1   0   1   3   3   2 |     TAG   0   0   0   0   0   0 | Trp TGG   2   3   2   3   2   2
--------------------------------------------------------------------------------------------------------------------------------------
Leu CTT   5   3   5   3   3   5 | Pro CCT   4   3   4   4   3   3 | His CAT   2   1   2   1   0   1 | Arg CGT   0   0   0   1   0   0
    CTC   6   6   7   8   8   8 |     CCC   5   5   5   6   6   5 |     CAC   1   3   1   2   3   2 |     CGC   1   1   2   2   1   1
    CTA   1   1   1   4   3   3 |     CCA   4   3   4   1   4   4 | Gln CAA   4   6   4   3   5   4 |     CGA   3   0   3   2   1   3
    CTG  13  13  14  14  12  12 |     CCG   3   3   3   3   4   5 |     CAG   7   9   7  10   6   7 |     CGG   3   1   3   0   1   1
--------------------------------------------------------------------------------------------------------------------------------------
Ile ATT   2   5   2   6   4   2 | Thr ACT   6   3   5   8   5   8 | Asn AAT   5   5   4   6   3   4 | Ser AGT   3   2   3   1   3   2
    ATC  11  12  11  10  12  10 |     ACC   7  16   8   9  12   6 |     AAC   3   4   4   1   5   4 |     AGC   4   6   4   9   6   4
    ATA   2   3   3   2   2   2 |     ACA  15  10  15  10  10  14 | Lys AAA  10  10  11   8   9  12 | Arg AGA   5   5   5   4   3   5
Met ATG   7   9   7   7   7   8 |     ACG   5   5   5   6   8   5 |     AAG   8   6   7   8   6   7 |     AGG   2   5   1   4   7   2
--------------------------------------------------------------------------------------------------------------------------------------
Val GTT   1   2   1   4   1   3 | Ala GCT   7   5   6   5   5   8 | Asp GAT   3   2   3   4   3   2 | Gly GGT   5   5   5   4   2   7
    GTC  12   6  11   4   7   9 |     GCC   8   7   8   9   8   8 |     GAC   6   6   6   7   6   6 |     GGC   7   4   7   6   7   6
    GTA   3   4   3   1   2   3 |     GCA   4   6   4   5   4   5 | Glu GAA   8   7   8   5   7   7 |     GGA   9   6   9   7   9   7
    GTG  14  11  14  15  16  13 |     GCG   3   3   3   4   4   4 |     GAG   3   4   3   6   5   4 |     GGG   5   9   6   8   9   7
--------------------------------------------------------------------------------------------------------------------------------------

----------------------------------------------------------------------------------------------------------------------
Phe TTT   4   7   2   2   2 | Ser TCT   3   6   3   3   2 | Tyr TAT   2   2   0   2   2 | Cys TGT   3   2   1   1   1
    TTC   8   6  10  12  13 |     TCC   5   5   6   8   9 |     TAC   6   8  11   6   6 |     TGC   6   5   6   6   6
Leu TTA   3   2   1   0   0 |     TCA   1   4   0   0   0 | *** TAA   0   0   0   0   0 | *** TGA   0   0   0   0   0
    TTG   1   4   0   0   0 |     TCG   4   2   3   3   3 |     TAG   0   0   0   0   0 | Trp TGG   2   2   3   2   2
----------------------------------------------------------------------------------------------------------------------
Leu CTT   4   3   2   2   2 | Pro CCT   3   3   2   0   1 | His CAT   2   2   0   0   0 | Arg CGT   0   0   1   0   0
    CTC   8   5  11   6   6 |     CCC   5   5  10   9   9 |     CAC   2   3   7   6   6 |     CGC   1   2   1   2   2
    CTA   6   3   1   1   1 |     CCA   3   2   0   0   1 | Gln CAA   4   6   1   2   2 |     CGA   1   1   0   0   0
    CTG   9  13  15  21  21 |     CCG   3   4   4   7   5 |     CAG   8   7   9   9   9 |     CGG   3   1   2   3   3
----------------------------------------------------------------------------------------------------------------------
Ile ATT   2   3   1   1   1 | Thr ACT   6   4   1   2   2 | Asn AAT   4   3   1   2   2 | Ser AGT   3   3   1   2   2
    ATC  13  13  14  16  16 |     ACC  11  12  11  15  15 |     AAC   3   4   9   4   4 |     AGC   4   6   6   6   6
    ATA   2   2   0   1   1 |     ACA  10  10   4   3   3 | Lys AAA  10   8   9   4   4 | Arg AGA   6   5   0   2   2
Met ATG  10  10  10   9   9 |     ACG   6   5   8   8   8 |     AAG   6   8  10  13  13 |     AGG   3   3   7   6   6
----------------------------------------------------------------------------------------------------------------------
Val GTT   1   2   1   0   0 | Ala GCT   3   6   4   5   5 | Asp GAT   2   3   2   2   2 | Gly GGT   2   4   1   0   0
    GTC   8   9   6  10   9 |     GCC  12  10  14  12  12 |     GAC   7   5   9   8   8 |     GGC   7   6   8  15  15
    GTA   4   3   1   0   0 |     GCA   8   5   4   4   3 | Glu GAA   8   7   5   3   3 |     GGA   9   5   4   3   2
    GTG  11  11  22  17  17 |     GCG   4   2   4   5   6 |     GAG   3   4   6   7   7 |     GGG   7  10  11   8   9
----------------------------------------------------------------------------------------------------------------------

Codon position x base (3x4) table for each sequence.

#1: Antrozous_pallidus
position  1:    T:0.17705    C:0.17705    A:0.32131    G:0.32459
position  2:    T:0.29508    C:0.27541    A:0.24918    G:0.18033
position  3:    T:0.20328    C:0.25246    A:0.24590    G:0.29836
Average         T:0.22514    C:0.23497    A:0.27213    G:0.26776

#2: Eptesicus_fuscus
position  1:    T:0.17705    C:0.18361    A:0.30820    G:0.33115
position  2:    T:0.28852    C:0.28525    A:0.24590    G:0.18033
position  3:    T:0.19672    C:0.28197    A:0.24262    G:0.27869
Average         T:0.22077    C:0.25027    A:0.26557    G:0.26339

#3: Ictidomys_tridecemlineatus
position  1:    T:0.17320    C:0.21569    A:0.31699    G:0.29412
position  2:    T:0.32026    C:0.27451    A:0.21895    G:0.18627
position  3:    T:0.15033    C:0.35294    A:0.21895    G:0.27778
Average         T:0.21460    C:0.28105    A:0.25163    G:0.25272

#4: Marmota_flaviventris
position  1:    T:0.18301    C:0.19935    A:0.32026    G:0.29739
position  2:    T:0.32026    C:0.27124    A:0.22222    G:0.18627
position  3:    T:0.16340    C:0.33007    A:0.21895    G:0.28758
Average         T:0.22222    C:0.26688    A:0.25381    G:0.25708

#5: Marmota_marmota
position  1:    T:0.17974    C:0.20261    A:0.32026    G:0.29739
position  2:    T:0.32026    C:0.27124    A:0.22222    G:0.18627
position  3:    T:0.16013    C:0.33333    A:0.21895    G:0.28758
Average         T:0.22004    C:0.26906    A:0.25381    G:0.25708

#6: Marmota_monax  
position  1:    T:0.17974    C:0.20261    A:0.32026    G:0.29739
position  2:    T:0.32026    C:0.27124    A:0.22222    G:0.18627
position  3:    T:0.17320    C:0.32353    A:0.21895    G:0.28431
Average         T:0.22440    C:0.26580    A:0.25381    G:0.25599

#7: Myotis_lucifugus
position  1:    T:0.18033    C:0.19016    A:0.29836    G:0.33115
position  2:    T:0.28525    C:0.28525    A:0.25574    G:0.17377
position  3:    T:0.20984    C:0.27541    A:0.22623    G:0.28852
Average         T:0.22514    C:0.25027    A:0.26011    G:0.26448

#8: Rhinolophus_ferrumequinum
position  1:    T:0.16721    C:0.18361    A:0.32459    G:0.32459
position  2:    T:0.29836    C:0.29836    A:0.23279    G:0.17049
position  3:    T:0.19016    C:0.29508    A:0.24590    G:0.26885
Average         T:0.21858    C:0.25902    A:0.26776    G:0.25464

#9: Urocitellus_parryii
position  1:    T:0.17974    C:0.20915    A:0.31699    G:0.29412
position  2:    T:0.32026    C:0.27451    A:0.22222    G:0.18301
position  3:    T:0.15359    C:0.34314    A:0.23203    G:0.27124
Average         T:0.21786    C:0.27560    A:0.25708    G:0.24946

#10: Ursus_americanus
position  1:    T:0.15359    C:0.21569    A:0.31046    G:0.32026
position  2:    T:0.31046    C:0.28431    A:0.22222    G:0.18301
position  3:    T:0.17974    C:0.32026    A:0.22876    G:0.27124
Average         T:0.21460    C:0.27342    A:0.25381    G:0.25817

#11: Ursus_arctos   
position  1:    T:0.15686    C:0.21242    A:0.31046    G:0.32026
position  2:    T:0.31046    C:0.28431    A:0.22222    G:0.18301
position  3:    T:0.17974    C:0.32026    A:0.22876    G:0.27124
Average         T:0.21569    C:0.27233    A:0.25381    G:0.25817

#12: Callorhinus_ursinus
position  1:    T:0.16013    C:0.20915    A:0.31373    G:0.31699
position  2:    T:0.31373    C:0.28105    A:0.22549    G:0.17974
position  3:    T:0.20915    C:0.27778    A:0.24510    G:0.26797
Average         T:0.22767    C:0.25599    A:0.26144    G:0.25490

#13: Heterocephalus_glaber
position  1:    T:0.16667    C:0.21242    A:0.33333    G:0.28758
position  2:    T:0.31373    C:0.26471    A:0.23529    G:0.18627
position  3:    T:0.20588    C:0.28758    A:0.22222    G:0.28431
Average         T:0.22876    C:0.25490    A:0.26362    G:0.25272

#14: Homo_sapiens   
position  1:    T:0.16993    C:0.19608    A:0.31046    G:0.32353
position  2:    T:0.31699    C:0.26471    A:0.22876    G:0.18954
position  3:    T:0.18627    C:0.28105    A:0.26471    G:0.26797
Average         T:0.22440    C:0.24728    A:0.26797    G:0.26035

#15: Lemmus_lemmus  
position  1:    T:0.17647    C:0.19281    A:0.33660    G:0.29412
position  2:    T:0.31699    C:0.28105    A:0.22876    G:0.17320
position  3:    T:0.17974    C:0.32026    A:0.22876    G:0.27124
Average         T:0.22440    C:0.26471    A:0.26471    G:0.24619

#16: Microtus_ochrogaster
position  1:    T:0.17974    C:0.19608    A:0.33987    G:0.28431
position  2:    T:0.31699    C:0.28431    A:0.22876    G:0.16993
position  3:    T:0.17974    C:0.33007    A:0.23856    G:0.25163
Average         T:0.22549    C:0.27015    A:0.26906    G:0.23529

#17: Mus_musculus   
position  1:    T:0.17647    C:0.19281    A:0.33007    G:0.30065
position  2:    T:0.31699    C:0.27451    A:0.23529    G:0.17320
position  3:    T:0.17974    C:0.32026    A:0.24183    G:0.25817
Average         T:0.22440    C:0.26253    A:0.26906    G:0.24401

#18: Mustela_erminea
position  1:    T:0.16340    C:0.20915    A:0.30719    G:0.32026
position  2:    T:0.31699    C:0.26471    A:0.22549    G:0.19281
position  3:    T:0.18954    C:0.31373    A:0.24183    G:0.25490
Average         T:0.22331    C:0.26253    A:0.25817    G:0.25599

#19: Mustela_putorius_furo
position  1:    T:0.16667    C:0.20261    A:0.31046    G:0.32026
position  2:    T:0.32026    C:0.26471    A:0.22222    G:0.19281
position  3:    T:0.18627    C:0.31699    A:0.23856    G:0.25817
Average         T:0.22440    C:0.26144    A:0.25708    G:0.25708

#20: Myodes_glareolus
position  1:    T:0.17974    C:0.18954    A:0.34641    G:0.28431
position  2:    T:0.31373    C:0.27451    A:0.23529    G:0.17647
position  3:    T:0.16667    C:0.32680    A:0.22876    G:0.27778
Average         T:0.22004    C:0.26362    A:0.27015    G:0.24619

#21: Neovison_vison 
position  1:    T:0.16013    C:0.21242    A:0.31046    G:0.31699
position  2:    T:0.32680    C:0.26144    A:0.22222    G:0.18954
position  3:    T:0.17647    C:0.32353    A:0.24510    G:0.25490
Average         T:0.22113    C:0.26580    A:0.25926    G:0.25381

#22: Ochotona_princeps
position  1:    T:0.16013    C:0.20915    A:0.32353    G:0.30719
position  2:    T:0.31373    C:0.26797    A:0.22549    G:0.19281
position  3:    T:0.20588    C:0.30392    A:0.18627    G:0.30392
Average         T:0.22658    C:0.26035    A:0.24510    G:0.26797

#23: Oryctolagus_cuniculus
position  1:    T:0.16013    C:0.19608    A:0.33333    G:0.31046
position  2:    T:0.32026    C:0.27451    A:0.21569    G:0.18954
position  3:    T:0.14379    C:0.34314    A:0.21242    G:0.30065
Average         T:0.20806    C:0.27124    A:0.25381    G:0.26688

#24: Phoca_vitulina 
position  1:    T:0.15686    C:0.20915    A:0.31046    G:0.32353
position  2:    T:0.31699    C:0.28105    A:0.22222    G:0.17974
position  3:    T:0.19281    C:0.30065    A:0.24183    G:0.26471
Average         T:0.22222    C:0.26362    A:0.25817    G:0.25599

#25: Pteropus_vampyrus
position  1:    T:0.15738    C:0.20328    A:0.32459    G:0.31475
position  2:    T:0.30820    C:0.28525    A:0.21967    G:0.18689
position  3:    T:0.14426    C:0.34754    A:0.24590    G:0.26230
Average         T:0.20328    C:0.27869    A:0.26339    G:0.25464

#26: Rattus_norvegicus
position  1:    T:0.17974    C:0.19608    A:0.32353    G:0.30065
position  2:    T:0.31373    C:0.27778    A:0.22876    G:0.17974
position  3:    T:0.17320    C:0.33987    A:0.20588    G:0.28105
Average         T:0.22222    C:0.27124    A:0.25272    G:0.25381

#27: Sorex_araneus  
position  1:    T:0.15033    C:0.21569    A:0.30065    G:0.33333
position  2:    T:0.31699    C:0.25490    A:0.25817    G:0.16993
position  3:    T:0.07516    C:0.45425    A:0.09804    G:0.37255
Average         T:0.18083    C:0.30828    A:0.21895    G:0.29194

#28: Talpa_europaea 
position  1:    T:0.14706    C:0.22222    A:0.30719    G:0.32353
position  2:    T:0.32026    C:0.27451    A:0.22222    G:0.18301
position  3:    T:0.07843    C:0.46078    A:0.07516    G:0.38562
Average         T:0.18192    C:0.31917    A:0.20153    G:0.29739

#29: Talpa_occidentalis
position  1:    T:0.15033    C:0.22222    A:0.30719    G:0.32026
position  2:    T:0.32026    C:0.27451    A:0.22222    G:0.18301
position  3:    T:0.07843    C:0.46405    A:0.07190    G:0.38562
Average         T:0.18301    C:0.32026    A:0.20044    G:0.29630

Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT     152 | Ser S TCT      94 | Tyr Y TAT      81 | Cys C TGT      74
      TTC     267 |       TCC     147 |       TAC     174 |       TGC     140
Leu L TTA      52 |       TCA      96 | *** * TAA       0 | *** * TGA       0
      TTG      96 |       TCG      54 |       TAG       0 | Trp W TGG      62
------------------------------------------------------------------------------
Leu L CTT     110 | Pro P CCT     103 | His H CAT      33 | Arg R CGT       3
      CTC     190 |       CCC     161 |       CAC      83 |       CGC      38
      CTA      81 |       CCA      82 | Gln Q CAA     124 |       CGA      51
      CTG     355 |       CCG     119 |       CAG     220 |       CGG      45
------------------------------------------------------------------------------
Ile I ATT     109 | Thr T ACT     151 | Asn N AAT     122 | Ser S AGT      81
      ATC     314 |       ACC     302 |       AAC     115 |       AGC     152
      ATA      68 |       ACA     297 | Lys K AAA     281 | Arg R AGA     129
Met M ATG     242 |       ACG     138 |       AAG     216 |       AGG     108
------------------------------------------------------------------------------
Val V GTT      36 | Ala A GCT     159 | Asp D GAT      94 | Gly G GGT     100
      GTC     250 |       GCC     255 |       GAC     162 |       GGC     168
      GTA      76 |       GCA     167 | Glu E GAA     185 |       GGA     225
      GTG     383 |       GCG     116 |       GAG     140 |       GGG     241
------------------------------------------------------------------------------

(Ambiguity data are not used in the counts.)


Codon position x base (3x4) table, overall

position  1:    T:0.16789    C:0.20273    A:0.31853    G:0.31086
position  2:    T:0.31356    C:0.27523    A:0.22889    G:0.18232
position  3:    T:0.16935    C:0.32901    A:0.21581    G:0.28583
Average         T:0.21694    C:0.26899    A:0.25441    G:0.25967

Codon frequencies under model, for use in evolver (TTT TTC TTA TTG ... GGG):
  0.00915230  0.01778057  0.01166278  0.01544679
  0.00803336  0.01560675  0.01023691  0.01355829
  0.00668075  0.01297898  0.00000000  0.00000000
  0.00532156  0.01033843  0.00000000  0.00898147
  0.01105160  0.02147042  0.01408307  0.01865234
  0.00970045  0.01884549  0.01236130  0.01637194
  0.00806715  0.01567240  0.01027998  0.01361533
  0.00642590  0.01248388  0.00818854  0.01084532
  0.01736417  0.03373412  0.02212718  0.02930637
  0.01524126  0.02960984  0.01942195  0.02572343
  0.01267503  0.02462433  0.01615180  0.02139228
  0.01009632  0.01961455  0.01286575  0.01704006
  0.01694620  0.03292211  0.02159456  0.02860094
  0.01487439  0.02889711  0.01895445  0.02510424
  0.01236993  0.02403160  0.01576302  0.02087735
  0.00985329  0.01914241  0.01255606  0.01662989



Nei & Gojobori 1986. dN/dS (dN, dS)
(Pairwise deletion)
(Note: This matrix is not used in later ML. analysis.
Use runmode = -2 for ML pairwise comparison.)

Antrozous_pallidus  
Eptesicus_fuscus     0.1968 (0.0327 0.1663)
Ictidomys_tridecemlineatus 0.2105 (0.1594 0.7569) 0.2051 (0.1422 0.6933)
Marmota_flaviventris 0.2247 (0.1567 0.6974) 0.2116 (0.1405 0.6643) 0.0762 (0.0073 0.0962)
Marmota_marmota      0.2210 (0.1567 0.7090) 0.2148 (0.1405 0.6542) 0.0642 (0.0059 0.0913) 0.3367 (0.0015 0.0043)
Marmota_monax        0.2210 (0.1567 0.7090) 0.2081 (0.1405 0.6753) 0.0528 (0.0059 0.1110) 0.0666 (0.0015 0.0219)-1.0000 (0.0000 0.0175)
Myotis_lucifugus     0.1686 (0.0404 0.2398) 0.1803 (0.0298 0.1650) 0.1798 (0.1425 0.7924) 0.1829 (0.1390 0.7599) 0.1799 (0.1390 0.7725) 0.1799 (0.1390 0.7725)
Rhinolophus_ferrumequinum 0.2297 (0.1138 0.4953) 0.2353 (0.1051 0.4466) 0.1511 (0.0987 0.6532) 0.1442 (0.0919 0.6375) 0.1463 (0.0919 0.6279) 0.1463 (0.0919 0.6279) 0.2338 (0.1011 0.4323)
Urocitellus_parryii  0.2246 (0.1586 0.7061) 0.2084 (0.1424 0.6834) 0.1266 (0.0073 0.0579) 0.1870 (0.0118 0.0629) 0.1765 (0.0103 0.0582) 0.1520 (0.0103 0.0676) 0.1803 (0.1409 0.7813) 0.1479 (0.0970 0.6557)
Ursus_americanus     0.2611 (0.1429 0.5472) 0.2642 (0.1286 0.4870) 0.1266 (0.0891 0.7041) 0.1263 (0.0849 0.6718) 0.1282 (0.0849 0.6619) 0.1243 (0.0849 0.6827) 0.2471 (0.1237 0.5004) 0.1572 (0.0662 0.4209) 0.1318 (0.0913 0.6925)
Ursus_arctos         0.2571 (0.1410 0.5484) 0.2599 (0.1268 0.4880) 0.1239 (0.0874 0.7058) 0.1235 (0.0832 0.6734) 0.1254 (0.0832 0.6634) 0.1215 (0.0832 0.6844) 0.2430 (0.1219 0.5015) 0.1530 (0.0645 0.4218) 0.1290 (0.0896 0.6941)-1.0000 (0.0015 0.0000)
Callorhinus_ursinus  0.3348 (0.1427 0.4261) 0.3130 (0.1256 0.4012) 0.1379 (0.0890 0.6456) 0.1422 (0.0848 0.5962) 0.1398 (0.0847 0.6061) 0.1398 (0.0847 0.6061) 0.2969 (0.1206 0.4061) 0.1832 (0.0645 0.3518) 0.1467 (0.0914 0.6232) 0.1168 (0.0224 0.1913) 0.1087 (0.0208 0.1916)
Heterocephalus_glaber 0.3049 (0.1577 0.5172) 0.2419 (0.1451 0.5997) 0.1048 (0.0697 0.6652) 0.0970 (0.0624 0.6441) 0.0954 (0.0624 0.6548) 0.0969 (0.0624 0.6445) 0.2401 (0.1453 0.6053) 0.1968 (0.1080 0.5486) 0.1094 (0.0737 0.6731) 0.1318 (0.0908 0.6892) 0.1290 (0.0891 0.6908) 0.1643 (0.0918 0.5587)
Homo_sapiens         0.3015 (0.1566 0.5194) 0.2735 (0.1381 0.5048) 0.1706 (0.1041 0.6100) 0.1774 (0.1005 0.5669) 0.1744 (0.1005 0.5765) 0.1689 (0.1005 0.5952) 0.2916 (0.1386 0.4754) 0.2171 (0.0915 0.4213) 0.1808 (0.1107 0.6122) 0.1917 (0.0899 0.4691) 0.1877 (0.0882 0.4701) 0.2462 (0.0876 0.3559) 0.1978 (0.1021 0.5161)
Lemmus_lemmus        0.1938 (0.1627 0.8396) 0.1921 (0.1598 0.8317) 0.1185 (0.0906 0.7644) 0.1182 (0.0856 0.7236) 0.1163 (0.0855 0.7355) 0.1127 (0.0855 0.7589) 0.1846 (0.1568 0.8491) 0.1367 (0.1036 0.7575) 0.1158 (0.0889 0.7676) 0.1267 (0.1028 0.8114) 0.1243 (0.1011 0.8136) 0.1297 (0.1044 0.8045) 0.1329 (0.0937 0.7048) 0.1491 (0.1106 0.7419)
Microtus_ochrogaster 0.1845 (0.1625 0.8807) 0.1784 (0.1590 0.8910) 0.1050 (0.0876 0.8351) 0.1078 (0.0826 0.7664) 0.1060 (0.0826 0.7790) 0.1044 (0.0826 0.7913) 0.1791 (0.1599 0.8928) 0.1321 (0.1017 0.7694) 0.1064 (0.0892 0.8388) 0.1263 (0.1009 0.7989) 0.1238 (0.0992 0.8010) 0.1363 (0.1036 0.7600) 0.1359 (0.0970 0.7141) 0.1510 (0.1129 0.7477) 0.0723 (0.0103 0.1420)
Mus_musculus         0.1935 (0.1733 0.8955) 0.1938 (0.1721 0.8880) 0.1273 (0.1003 0.7881) 0.1303 (0.0955 0.7327) 0.1282 (0.0955 0.7447) 0.1282 (0.0955 0.7447) 0.2065 (0.1663 0.8050) 0.1613 (0.1124 0.6968) 0.1314 (0.1005 0.7651) 0.1420 (0.1097 0.7721) 0.1394 (0.1079 0.7741) 0.1491 (0.1109 0.7440) 0.1438 (0.1098 0.7638) 0.1712 (0.1218 0.7113) 0.0821 (0.0320 0.3898) 0.0885 (0.0351 0.3963)
Mustela_erminea      0.2582 (0.1444 0.5595) 0.2398 (0.1290 0.5382) 0.1404 (0.0992 0.7068) 0.1430 (0.0949 0.6638) 0.1407 (0.0949 0.6747) 0.1407 (0.0949 0.6747) 0.2449 (0.1281 0.5231) 0.1599 (0.0725 0.4536) 0.1505 (0.1014 0.6738) 0.1533 (0.0431 0.2809) 0.1474 (0.0415 0.2814) 0.2136 (0.0422 0.1976) 0.1439 (0.0962 0.6687) 0.1839 (0.0843 0.4584) 0.1418 (0.1100 0.7759) 0.1482 (0.1098 0.7406) 0.1585 (0.1135 0.7157)
Mustela_putorius_furo 0.2539 (0.1516 0.5969) 0.2446 (0.1360 0.5561) 0.1279 (0.0984 0.7694) 0.1301 (0.0941 0.7231) 0.1280 (0.0941 0.7349) 0.1280 (0.0941 0.7349) 0.2459 (0.1351 0.5494) 0.1519 (0.0725 0.4774) 0.1370 (0.1005 0.7338) 0.1500 (0.0431 0.2871) 0.1443 (0.0415 0.2876) 0.1870 (0.0422 0.2257) 0.1404 (0.0981 0.6990) 0.1847 (0.0876 0.4743) 0.1374 (0.1108 0.8066) 0.1437 (0.1106 0.7699) 0.1444 (0.1143 0.7915) 0.1945 (0.0059 0.0303)
Myodes_glareolus     0.1611 (0.1619 1.0052) 0.1641 (0.1597 0.9731) 0.1006 (0.0893 0.8877) 0.0987 (0.0842 0.8535) 0.0971 (0.0842 0.8678) 0.0940 (0.0842 0.8961) 0.1614 (0.1560 0.9667) 0.1298 (0.1022 0.7875) 0.0986 (0.0908 0.9209) 0.1183 (0.1006 0.8504) 0.1160 (0.0989 0.8528) 0.1250 (0.1021 0.8172) 0.1242 (0.0931 0.7501) 0.1330 (0.1067 0.8020) 0.0741 (0.0102 0.1382) 0.0717 (0.0088 0.1224) 0.0811 (0.0350 0.4312) 0.1411 (0.1086 0.7696) 0.1367 (0.1094 0.8003)
Neovison_vison       0.2513 (0.1466 0.5836) 0.2413 (0.1312 0.5437) 0.1276 (0.0965 0.7565) 0.1297 (0.0922 0.7110) 0.1276 (0.0922 0.7225) 0.1276 (0.0922 0.7225) 0.2473 (0.1314 0.5313) 0.1551 (0.0677 0.4368) 0.1411 (0.0987 0.6995) 0.1381 (0.0354 0.2560) 0.1318 (0.0338 0.2565) 0.1752 (0.0345 0.1971) 0.1454 (0.0974 0.6696) 0.1982 (0.0924 0.4661) 0.1367 (0.1061 0.7766) 0.1429 (0.1059 0.7414) 0.1460 (0.1096 0.7505) 0.4008 (0.0103 0.0258) 0.3961 (0.0111 0.0280) 0.1339 (0.1047 0.7825)
Ochotona_princeps    0.2499 (0.1688 0.6754) 0.2353 (0.1550 0.6589) 0.1024 (0.0869 0.8488) 0.0997 (0.0860 0.8626) 0.0981 (0.0860 0.8769) 0.0981 (0.0860 0.8769) 0.2245 (0.1496 0.6663) 0.1995 (0.1108 0.5555) 0.1097 (0.0943 0.8593) 0.1436 (0.0977 0.6803) 0.1408 (0.0960 0.6820) 0.1570 (0.0954 0.6074) 0.1149 (0.0805 0.7003) 0.1681 (0.1117 0.6644) 0.1160 (0.0981 0.8452) 0.1205 (0.1040 0.8630) 0.1285 (0.1074 0.8358) 0.1521 (0.1009 0.6637) 0.1530 (0.1020 0.6671) 0.1108 (0.1011 0.9131) 0.1543 (0.1007 0.6527)
Oryctolagus_cuniculus 0.1914 (0.1380 0.7211) 0.1853 (0.1237 0.6674) 0.1013 (0.0617 0.6086) 0.1021 (0.0616 0.6031) 0.1004 (0.0616 0.6131) 0.0973 (0.0616 0.6328) 0.1790 (0.1196 0.6678) 0.1258 (0.0765 0.6079) 0.1129 (0.0712 0.6304) 0.1063 (0.0707 0.6646) 0.1036 (0.0690 0.6661) 0.1210 (0.0684 0.5654) 0.1005 (0.0719 0.7148) 0.1502 (0.0858 0.5717) 0.1008 (0.0865 0.8583) 0.1035 (0.0877 0.8471) 0.1070 (0.0915 0.8554) 0.1135 (0.0730 0.6432) 0.1138 (0.0738 0.6482) 0.0910 (0.0860 0.9451) 0.1060 (0.0706 0.6661) 0.1546 (0.0572 0.3699)
Phoca_vitulina       0.3011 (0.1393 0.4628) 0.3003 (0.1232 0.4101) 0.1403 (0.0889 0.6334) 0.1401 (0.0846 0.6037) 0.1423 (0.0846 0.5946) 0.1423 (0.0846 0.5946) 0.2708 (0.1165 0.4302) 0.1896 (0.0613 0.3235) 0.1493 (0.0913 0.6114) 0.1284 (0.0224 0.1744) 0.1194 (0.0209 0.1747) 0.1555 (0.0089 0.0570) 0.1619 (0.0916 0.5660) 0.2462 (0.0866 0.3519) 0.1307 (0.1028 0.7867) 0.1387 (0.1026 0.7396) 0.1442 (0.1080 0.7486) 0.2343 (0.0423 0.1805) 0.2034 (0.0423 0.2078) 0.1259 (0.1006 0.7989) 0.1921 (0.0346 0.1800) 0.1652 (0.0969 0.5867) 0.1235 (0.0691 0.5592)
Pteropus_vampyrus    0.2845 (0.1506 0.5294) 0.2761 (0.1374 0.4977) 0.1403 (0.0912 0.6499) 0.1426 (0.0869 0.6095) 0.1402 (0.0869 0.6197) 0.1402 (0.0869 0.6197) 0.2690 (0.1327 0.4931) 0.2039 (0.0684 0.3356) 0.1401 (0.0936 0.6679) 0.1350 (0.0637 0.4720) 0.1313 (0.0621 0.4729) 0.1523 (0.0612 0.4019) 0.1717 (0.0937 0.5455) 0.1513 (0.0813 0.5372) 0.1497 (0.1069 0.7138) 0.1494 (0.1084 0.7251) 0.1781 (0.1163 0.6529) 0.1638 (0.0652 0.3983) 0.1441 (0.0644 0.4469) 0.1393 (0.1060 0.7614) 0.1575 (0.0637 0.4043) 0.1608 (0.1012 0.6292) 0.1243 (0.0740 0.5952) 0.1533 (0.0613 0.3999)
Rattus_norvegicus    0.1739 (0.1673 0.9618) 0.1837 (0.1653 0.8999) 0.1175 (0.1020 0.8677) 0.1166 (0.0971 0.8324) 0.1147 (0.0971 0.8462) 0.1112 (0.0971 0.8734) 0.1723 (0.1595 0.9260) 0.1370 (0.1104 0.8055) 0.1157 (0.1038 0.8973) 0.1311 (0.1079 0.8233) 0.1286 (0.1062 0.8255) 0.1369 (0.1089 0.7954) 0.1503 (0.1106 0.7361) 0.1465 (0.1174 0.8013) 0.0770 (0.0335 0.4354) 0.0779 (0.0351 0.4500) 0.0665 (0.0177 0.2662) 0.1533 (0.1117 0.7285) 0.1419 (0.1125 0.7934) 0.0795 (0.0350 0.4397) 0.1434 (0.1078 0.7522) 0.1025 (0.1023 0.9981) 0.0981 (0.0882 0.8990) 0.1331 (0.1062 0.7982) 0.1545 (0.1145 0.7415)
Sorex_araneus        0.1785 (0.2191 1.2274) 0.1733 (0.2064 1.1912) 0.1828 (0.1851 1.0124) 0.1690 (0.1801 1.0658) 0.1694 (0.1792 1.0577) 0.1610 (0.1792 1.1132) 0.1399 (0.1954 1.3960) 0.1514 (0.1671 1.1038) 0.1688 (0.1821 1.0790) 0.1318 (0.1537 1.1656) 0.1328 (0.1554 1.1698) 0.1256 (0.1566 1.2470) 0.1751 (0.1947 1.1119) 0.1261 (0.1689 1.3389) 0.1544 (0.1685 1.0911) 0.1581 (0.1677 1.0602) 0.1453 (0.1677 1.1542) 0.1289 (0.1506 1.1680) 0.1293 (0.1497 1.1579) 0.1507 (0.1677 1.1127) 0.1334 (0.1513 1.1348) 0.1797 (0.1956 1.0886) 0.2067 (0.1756 0.8492) 0.1390 (0.1559 1.1213) 0.1593 (0.1618 1.0159) 0.1583 (0.1656 1.0461)
Talpa_europaea       0.1915 (0.1796 0.9378) 0.1950 (0.1717 0.8806) 0.1404 (0.1074 0.7647) 0.1267 (0.1047 0.8263) 0.1265 (0.1030 0.8141) 0.1226 (0.1030 0.8398) 0.1890 (0.1791 0.9478) 0.1213 (0.1167 0.9625) 0.1273 (0.1064 0.8361) 0.1189 (0.1069 0.8992) 0.1166 (0.1051 0.9017) 0.1066 (0.1048 0.9829) 0.1471 (0.1340 0.9105) 0.1448 (0.1402 0.9678) 0.1301 (0.1370 1.0530) 0.1288 (0.1383 1.0731) 0.1376 (0.1343 0.9761) 0.1089 (0.1059 0.9725) 0.1106 (0.1059 0.9571) 0.1248 (0.1393 1.1161) 0.1060 (0.1026 0.9678) 0.1525 (0.1364 0.8944) 0.1414 (0.1119 0.7917) 0.1140 (0.1055 0.9253) 0.1707 (0.1268 0.7427) 0.1449 (0.1366 0.9428) 0.2233 (0.1437 0.6434)
Talpa_occidentalis   0.1888 (0.1776 0.9409) 0.1922 (0.1698 0.8834) 0.1357 (0.1090 0.8033) 0.1224 (0.1063 0.8686) 0.1222 (0.1046 0.8557) 0.1222 (0.1046 0.8557) 0.1893 (0.1771 0.9359) 0.1170 (0.1167 0.9973) 0.1229 (0.1081 0.8790) 0.1147 (0.1051 0.9162) 0.1125 (0.1034 0.9188) 0.1011 (0.1030 1.0185) 0.1470 (0.1321 0.8991) 0.1379 (0.1383 1.0029) 0.1279 (0.1352 1.0568) 0.1288 (0.1364 1.0593) 0.1331 (0.1325 0.9954) 0.1033 (0.1041 1.0076) 0.1050 (0.1041 0.9915) 0.1227 (0.1374 1.1204) 0.1022 (0.1009 0.9867) 0.1453 (0.1346 0.9259) 0.1304 (0.1102 0.8448) 0.1083 (0.1037 0.9580) 0.1602 (0.1249 0.7802) 0.1425 (0.1348 0.9460) 0.2234 (0.1418 0.6349) 0.0682 (0.0015 0.0215)

TREE #  1:  (((((((17, 26), ((20, 16), 15)), 13), ((4, (5, 6)), (9, 3))), (23, 22)), 14), ((((2, 1, 7), (25, 8)), (((19, 18), 21), ((11, 10), (24, 12)))), (27, (28, 29))));   MP score: -1
This is a rooted tree.  Please check!
lnL(ntime: 55  np: 58):  -7896.276119      +0.000000
  30..31   31..32   32..33   33..34   34..35   35..36   36..17   36..26   35..37   37..38   38..20   38..16   37..15   34..13   33..39   39..40   40..4    40..41   41..5    41..6    39..42   42..9    42..3    32..43   43..23   43..22   31..14   30..44   44..45   45..46   46..47   47..2    47..1    47..7    46..48   48..25   48..8    45..49   49..50   50..51   51..19   51..18   50..21   49..52   52..53   53..11   53..10   52..54   54..24   54..12   44..55   55..27   55..56   56..28   56..29 
 0.015516 0.058595 0.046164 0.025181 0.351663 0.130860 0.099769 0.134170 0.075975 0.020715 0.055994 0.057626 0.054788 0.299148 0.311448 0.009051 0.006660 0.000004 0.000004 0.013363 0.035772 0.023745 0.037401 0.171739 0.152567 0.272341 0.260803 0.020234 0.030964 0.033626 0.401786 0.072928 0.150788 0.126876 0.021996 0.229718 0.181249 0.113821 0.135483 0.020240 0.020046 0.016244 0.006649 0.020100 0.124041 0.000004 0.003276 0.031522 0.026653 0.036274 0.442810 0.692904 0.316072 0.009945 0.010248 2.488815 0.152624 0.202917

Note: Branch length is defined as number of nucleotide substitutions per codon (not per nucleotide site).

tree length =  6.017560

(((((((17: 0.099769, 26: 0.134170): 0.130860, ((20: 0.055994, 16: 0.057626): 0.020715, 15: 0.054788): 0.075975): 0.351663, 13: 0.299148): 0.025181, ((4: 0.006660, (5: 0.000004, 6: 0.013363): 0.000004): 0.009051, (9: 0.023745, 3: 0.037401): 0.035772): 0.311448): 0.046164, (23: 0.152567, 22: 0.272341): 0.171739): 0.058595, 14: 0.260803): 0.015516, ((((2: 0.072928, 1: 0.150788, 7: 0.126876): 0.401786, (25: 0.229718, 8: 0.181249): 0.021996): 0.033626, (((19: 0.020046, 18: 0.016244): 0.020240, 21: 0.006649): 0.135483, ((11: 0.000004, 10: 0.003276): 0.124041, (24: 0.026653, 12: 0.036274): 0.031522): 0.020100): 0.113821): 0.030964, (27: 0.692904, (28: 0.009945, 29: 0.010248): 0.316072): 0.442810): 0.020234);

(((((((Mus_musculus: 0.099769, Rattus_norvegicus: 0.134170): 0.130860, ((Myodes_glareolus: 0.055994, Microtus_ochrogaster: 0.057626): 0.020715, Lemmus_lemmus: 0.054788): 0.075975): 0.351663, Heterocephalus_glaber: 0.299148): 0.025181, ((Marmota_flaviventris: 0.006660, (Marmota_marmota: 0.000004, Marmota_monax: 0.013363): 0.000004): 0.009051, (Urocitellus_parryii: 0.023745, Ictidomys_tridecemlineatus: 0.037401): 0.035772): 0.311448): 0.046164, (Oryctolagus_cuniculus: 0.152567, Ochotona_princeps: 0.272341): 0.171739): 0.058595, Homo_sapiens: 0.260803): 0.015516, ((((Eptesicus_fuscus: 0.072928, Antrozous_pallidus: 0.150788, Myotis_lucifugus: 0.126876): 0.401786, (Pteropus_vampyrus: 0.229718, Rhinolophus_ferrumequinum: 0.181249): 0.021996): 0.033626, (((Mustela_putorius_furo: 0.020046, Mustela_erminea: 0.016244): 0.020240, Neovison_vison: 0.006649): 0.135483, ((Ursus_arctos: 0.000004, Ursus_americanus: 0.003276): 0.124041, (Phoca_vitulina: 0.026653, Callorhinus_ursinus: 0.036274): 0.031522): 0.020100): 0.113821): 0.030964, (Sorex_araneus: 0.692904, (Talpa_europaea: 0.009945, Talpa_occidentalis: 0.010248): 0.316072): 0.442810): 0.020234);

Detailed output identifying parameters

kappa (ts/tv) =  2.48882

w (dN/dS) for branches:  0.15262 0.20292

dN & dS for each branch

 branch          t       N       S   dN/dS      dN      dS  N*dN  S*dS

  30..31     0.016   670.8   247.2  0.1526  0.0021  0.0136   1.4   3.4
  31..32     0.059   670.8   247.2  0.1526  0.0078  0.0513   5.3  12.7
  32..33     0.046   670.8   247.2  0.1526  0.0062  0.0404   4.1  10.0
  33..34     0.025   670.8   247.2  0.1526  0.0034  0.0220   2.3   5.4
  34..35     0.352   670.8   247.2  0.1526  0.0470  0.3078  31.5  76.1
  35..36     0.131   670.8   247.2  0.1526  0.0175  0.1145  11.7  28.3
  36..17     0.100   670.8   247.2  0.1526  0.0133  0.0873   8.9  21.6
  36..26     0.134   670.8   247.2  0.1526  0.0179  0.1174  12.0  29.0
  35..37     0.076   670.8   247.2  0.1526  0.0101  0.0665   6.8  16.4
  37..38     0.021   670.8   247.2  0.1526  0.0028  0.0181   1.9   4.5
  38..20     0.056   670.8   247.2  0.1526  0.0075  0.0490   5.0  12.1
  38..16     0.058   670.8   247.2  0.1526  0.0077  0.0504   5.2  12.5
  37..15     0.055   670.8   247.2  0.1526  0.0073  0.0480   4.9  11.9
  34..13     0.299   670.8   247.2  0.1526  0.0400  0.2618  26.8  64.7
  33..39     0.311   670.8   247.2  0.1526  0.0416  0.2726  27.9  67.4
  39..40     0.009   670.8   247.2  0.1526  0.0012  0.0079   0.8   2.0
  40..4      0.007   670.8   247.2  0.2029  0.0011  0.0053   0.7   1.3
  40..41     0.000   670.8   247.2  0.1526  0.0000  0.0000   0.0   0.0
  41..5      0.000   670.8   247.2  0.2029  0.0000  0.0000   0.0   0.0
  41..6      0.013   670.8   247.2  0.2029  0.0022  0.0107   1.5   2.6
  39..42     0.036   670.8   247.2  0.1526  0.0048  0.0313   3.2   7.7
  42..9      0.024   670.8   247.2  0.2029  0.0038  0.0190   2.6   4.7
  42..3      0.037   670.8   247.2  0.2029  0.0061  0.0299   4.1   7.4
  32..43     0.172   670.8   247.2  0.1526  0.0229  0.1503  15.4  37.2
  43..23     0.153   670.8   247.2  0.1526  0.0204  0.1335  13.7  33.0
  43..22     0.272   670.8   247.2  0.1526  0.0364  0.2384  24.4  58.9
  31..14     0.261   670.8   247.2  0.1526  0.0348  0.2283  23.4  56.4
  30..44     0.020   670.8   247.2  0.1526  0.0027  0.0177   1.8   4.4
  44..45     0.031   670.8   247.2  0.1526  0.0041  0.0271   2.8   6.7
  45..46     0.034   670.8   247.2  0.1526  0.0045  0.0294   3.0   7.3
  46..47     0.402   670.8   247.2  0.1526  0.0537  0.3517  36.0  86.9
  47..2      0.073   670.8   247.2  0.2029  0.0118  0.0582   7.9  14.4
  47..1      0.151   670.8   247.2  0.2029  0.0244  0.1204  16.4  29.8
  47..7      0.127   670.8   247.2  0.2029  0.0206  0.1013  13.8  25.0
  46..48     0.022   670.8   247.2  0.1526  0.0029  0.0193   2.0   4.8
  48..25     0.230   670.8   247.2  0.1526  0.0307  0.2011  20.6  49.7
  48..8      0.181   670.8   247.2  0.2029  0.0294  0.1447  19.7  35.8
  45..49     0.114   670.8   247.2  0.1526  0.0152  0.0996  10.2  24.6
  49..50     0.135   670.8   247.2  0.1526  0.0181  0.1186  12.1  29.3
  50..51     0.020   670.8   247.2  0.1526  0.0027  0.0177   1.8   4.4
  51..19     0.020   670.8   247.2  0.1526  0.0027  0.0175   1.8   4.3
  51..18     0.016   670.8   247.2  0.1526  0.0022  0.0142   1.5   3.5
  50..21     0.007   670.8   247.2  0.1526  0.0009  0.0058   0.6   1.4
  49..52     0.020   670.8   247.2  0.1526  0.0027  0.0176   1.8   4.3
  52..53     0.124   670.8   247.2  0.1526  0.0166  0.1086  11.1  26.8
  53..11     0.000   670.8   247.2  0.2029  0.0000  0.0000   0.0   0.0
  53..10     0.003   670.8   247.2  0.2029  0.0005  0.0026   0.4   0.6
  52..54     0.032   670.8   247.2  0.1526  0.0042  0.0276   2.8   6.8
  54..24     0.027   670.8   247.2  0.1526  0.0036  0.0233   2.4   5.8
  54..12     0.036   670.8   247.2  0.1526  0.0048  0.0317   3.3   7.8
  44..55     0.443   670.8   247.2  0.1526  0.0592  0.3876  39.7  95.8
  55..27     0.693   670.8   247.2  0.1526  0.0926  0.6065  62.1 149.9
  55..56     0.316   670.8   247.2  0.1526  0.0422  0.2766  28.3  68.4
  56..28     0.010   670.8   247.2  0.1526  0.0013  0.0087   0.9   2.2
  56..29     0.010   670.8   247.2  0.1526  0.0014  0.0090   0.9   2.2

tree length for dN:       0.8213
tree length for dS:       5.2194

dS tree:
(((((((Mus_musculus: 0.087323, Rattus_norvegicus: 0.117432): 0.114535, ((Myodes_glareolus: 0.049009, Microtus_ochrogaster: 0.050437): 0.018131, Lemmus_lemmus: 0.047953): 0.066497): 0.307792, Heterocephalus_glaber: 0.261829): 0.022039, ((Marmota_flaviventris: 0.005316, (Marmota_marmota: 0.000003, Marmota_monax: 0.010667): 0.000004): 0.007922, (Urocitellus_parryii: 0.018954, Ictidomys_tridecemlineatus: 0.029855): 0.031309): 0.272594): 0.040405, (Oryctolagus_cuniculus: 0.133534, Ochotona_princeps: 0.238366): 0.150314): 0.051285, Homo_sapiens: 0.228267): 0.013581, ((((Eptesicus_fuscus: 0.058213, Antrozous_pallidus: 0.120363, Myotis_lucifugus: 0.101276): 0.351663, (Pteropus_vampyrus: 0.201060, Rhinolophus_ferrumequinum: 0.144678): 0.019252): 0.029431, (((Mustela_putorius_furo: 0.017545, Mustela_erminea: 0.014218): 0.017715, Neovison_vison: 0.005820): 0.118582, ((Ursus_arctos: 0.000003, Ursus_americanus: 0.002615): 0.108567, (Phoca_vitulina: 0.023328, Callorhinus_ursinus: 0.031749): 0.027589): 0.017592): 0.099622): 0.027101, (Sorex_araneus: 0.606464, (Talpa_europaea: 0.008705, Talpa_occidentalis: 0.008970): 0.276642): 0.387569): 0.017710);
dN tree:
(((((((Mus_musculus: 0.013328, Rattus_norvegicus: 0.017923): 0.017481, ((Myodes_glareolus: 0.007480, Microtus_ochrogaster: 0.007698): 0.002767, Lemmus_lemmus: 0.007319): 0.010149): 0.046976, Heterocephalus_glaber: 0.039961): 0.003364, ((Marmota_flaviventris: 0.001079, (Marmota_marmota: 0.000001, Marmota_monax: 0.002164): 0.000001): 0.001209, (Urocitellus_parryii: 0.003846, Ictidomys_tridecemlineatus: 0.006058): 0.004779): 0.041604): 0.006167, (Oryctolagus_cuniculus: 0.020381, Ochotona_princeps: 0.036380): 0.022942): 0.007827, Homo_sapiens: 0.034839): 0.002073, ((((Eptesicus_fuscus: 0.011812, Antrozous_pallidus: 0.024424, Myotis_lucifugus: 0.020551): 0.053672, (Pteropus_vampyrus: 0.030687, Rhinolophus_ferrumequinum: 0.029358): 0.002938): 0.004492, (((Mustela_putorius_furo: 0.002678, Mustela_erminea: 0.002170): 0.002704, Neovison_vison: 0.000888): 0.018098, ((Ursus_arctos: 0.000001, Ursus_americanus: 0.000531): 0.016570, (Phoca_vitulina: 0.003560, Callorhinus_ursinus: 0.004846): 0.004211): 0.002685): 0.015205): 0.004136, (Sorex_araneus: 0.092561, (Talpa_europaea: 0.001329, Talpa_occidentalis: 0.001369): 0.042222): 0.059152): 0.002703);

w ratios as node labels:
(((((((Mus_musculus #0.152624 , Rattus_norvegicus #0.152624 ) #0.152624 , ((Myodes_glareolus #0.152624 , Microtus_ochrogaster #0.152624 ) #0.152624 , Lemmus_lemmus #0.152624 ) #0.152624 ) #0.152624 , Heterocephalus_glaber #0.152624 ) #0.152624 , ((Marmota_flaviventris #0.202917 , (Marmota_marmota #0.202917 , Marmota_monax #0.202917 ) #0.152624 ) #0.152624 , (Urocitellus_parryii #0.202917 , Ictidomys_tridecemlineatus #0.202917 ) #0.152624 ) #0.152624 ) #0.152624 , (Oryctolagus_cuniculus #0.152624 , Ochotona_princeps #0.152624 ) #0.152624 ) #0.152624 , Homo_sapiens #0.152624 ) #0.152624 , ((((Eptesicus_fuscus #0.202917 , Antrozous_pallidus #0.202917 , Myotis_lucifugus #0.202917 ) #0.152624 , (Pteropus_vampyrus #0.152624 , Rhinolophus_ferrumequinum #0.202917 ) #0.152624 ) #0.152624 , (((Mustela_putorius_furo #0.152624 , Mustela_erminea #0.152624 ) #0.152624 , Neovison_vison #0.152624 ) #0.152624 , ((Ursus_arctos #0.202917 , Ursus_americanus #0.202917 ) #0.152624 , (Phoca_vitulina #0.152624 , Callorhinus_ursinus #0.152624 ) #0.152624 ) #0.152624 ) #0.152624 ) #0.152624 , (Sorex_araneus #0.152624 , (Talpa_europaea #0.152624 , Talpa_occidentalis #0.152624 ) #0.152624 ) #0.152624 ) #0.152624 );


Time used:  3:54
